RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W RGT1P32862 1170 aa3.47□□□□□ -1.85
YLR400WYLR400W HES1P35843 434 aa3.47□□□□□ -1.85
YLR400WYLR400W BYE1P36106 594 aa3.47□□□□□ -1.85
YLR400WYLR400W YBL029WP38201 376 aa3.47□□□□□ -1.85
YLR400WYLR400W ERC1P38767 581 aa3.47□□□□□ -1.85
YLR400WYLR400W RGI2P40188 164 aa3.47□□□□□ -1.85
YLR400WYLR400W SEC24P40482 926 aaKnown RBP3.47□□□□□ -1.85
YLR400WYLR400W MSY1P48527 492 aa3.47□□□□□ -1.85
YLR400WYLR400W YML6P51998 286 aa3.47□□□□□ -1.85
YLR400WYLR400W JJJ1P53863 590 aa3.47□□□□□ -1.85
YLR400WYLR400W INA17Q02888 182 aa3.47□□□□□ -1.85
YLR400WYLR400W YMR155WQ03795 547 aa3.47□□□□□ -1.85
YLR400WYLR400W ARP9Q05123 467 aa3.47□□□□□ -1.85
YLR400WYLR400W YDL242WQ07746 117 aa3.47□□□□□ -1.85
YLR400WYLR400W GPN2Q08726 347 aaPredicted RBP3.47□□□□□ -1.85
YLR400WYLR400W RCN2Q12044 265 aa3.47□□□□□ -1.85
YLR400WYLR400W LCB4Q12246 624 aa3.47□□□□□ -1.85
YLR400WYLR400W RTN2Q12443 393 aa3.47□□□□□ -1.85
YLR400WYLR400W YPR089WO13585 888 aa3.46□□□□□ -1.86
YLR400WYLR400W HSP82P02829 709 aaKnown RBP3.46□□□□□ -1.86
YLR400WYLR400W CBS1P14066 229 aa3.46□□□□□ -1.86
YLR400WYLR400W YAP1P19880 650 aaKnown RBP3.46□□□□□ -1.86
YLR400WYLR400W SRP54P20424 541 aaKnown RBP3.46□□□□□ -1.86
YLR400WYLR400W OCA4P25366 362 aa3.46□□□□□ -1.86
YLR400WYLR400W TFC3P34111 1160 aa3.46□□□□□ -1.86
YLR400WYLR400W AUR1P36107 401 aaPredicted RBP3.46□□□□□ -1.86
YLR400WYLR400W SRO77P38163 1010 aa3.46□□□□□ -1.86
YLR400WYLR400W RTS1P38903 757 aa3.46□□□□□ -1.86
YLR400WYLR400W MET18P40469 1032 aa3.46□□□□□ -1.86
YLR400WYLR400W DJP1P40564 432 aa3.46□□□□□ -1.86
YLR400WYLR400W MET28P40573 187 aa3.46□□□□□ -1.86
YLR400WYLR400W SWP82P43554 623 aa3.46□□□□□ -1.86
YLR400WYLR400W NPA3P47122 385 aa3.46□□□□□ -1.86
YLR400WYLR400W SXM1Q04175 944 aaKnown RBP3.46□□□□□ -1.86
YLR400WYLR400W YLR345WQ06137 509 aa3.46□□□□□ -1.86
YLR400WYLR400W YLR352WQ06479 807 aa3.46□□□□□ -1.86
YLR400WYLR400W BAG7Q12128 409 aa3.46□□□□□ -1.86
YLR400WYLR400W GET3Q12154 354 aaKnown RBP3.46□□□□□ -1.86
YLR400WYLR400W SFI1Q12369 946 aa3.46□□□□□ -1.86
YLR400WYLR400W YOL159C-AQ3E769 90 aa3.46□□□□□ -1.86
YLR400WYLR400W COX1P00401 534 aa3.45□□□□□ -1.86
YLR400WYLR400W ILS1P09436 1072 aaKnown RBP3.45□□□□□ -1.86
YLR400WYLR400W YER190C-BP0CX94 160 aa3.45□□□□□ -1.86
YLR400WYLR400W YEL077W-AP0CX95 160 aa3.45□□□□□ -1.86
YLR400WYLR400W YGR296C-BP0CX96 160 aa3.45□□□□□ -1.86
YLR400WYLR400W YPL283W-BP0CX97 160 aa3.45□□□□□ -1.86
YLR400WYLR400W YPR204C-AP0CX98 160 aa3.45□□□□□ -1.86
YLR400WYLR400W PRE8P23639 250 aa3.45□□□□□ -1.86
YLR400WYLR400W POL4P25615 582 aa3.45□□□□□ -1.86
YLR400WYLR400W SWI3P32591 825 aa3.45□□□□□ -1.86
YLR400WYLR400W KTR3P38130 404 aaPredicted RBP3.45□□□□□ -1.86
YLR400WYLR400W MAL33P38157 468 aa3.45□□□□□ -1.86
YLR400WYLR400W LRP1P38801 184 aaKnown RBP3.45□□□□□ -1.86
YLR400WYLR400W MAM1P40065 302 aa3.45□□□□□ -1.86
YLR400WYLR400W ROK1P45818 564 aaPredicted RBP3.45□□□□□ -1.86
YLR400WYLR400W ZDS2P54786 942 aa3.45□□□□□ -1.86
YLR400WYLR400W RPT6Q01939 405 aaKnown RBP3.45□□□□□ -1.86
YLR400WYLR400W UBP16Q02863 499 aa3.45□□□□□ -1.86
YLR400WYLR400W SKG3Q06315 1026 aa3.45□□□□□ -1.86
YLR400WYLR400W TPO3Q06451 622 aa3.45□□□□□ -1.86
YLR400WYLR400W YEH1Q07804 573 aa3.45□□□□□ -1.86
YLR400WYLR400W YJR112W-AQ3E743 109 aa3.45□□□□□ -1.86
YLR400WYLR400W YPT6Q99260 215 aa3.45□□□□□ -1.86
YLR400WYLR400W YBR085C-AO43137 85 aa3.44□□□□□ -1.86
YLR400WYLR400W PWP1P21304 576 aaKnown RBP3.44□□□□□ -1.86
YLR400WYLR400W OPI1P21957 404 aa3.44□□□□□ -1.86
YLR400WYLR400W PDB1P32473 366 aaKnown RBP3.44□□□□□ -1.86
YLR400WYLR400W GDA1P32621 518 aa3.44□□□□□ -1.86
YLR400WYLR400W PEX5P35056 612 aa3.44□□□□□ -1.86
YLR400WYLR400W YNG2P38806 282 aaKnown RBP3.44□□□□□ -1.86
YLR400WYLR400W SMF1P38925 575 aa3.44□□□□□ -1.86
YLR400WYLR400W PHM8P40025 321 aa3.44□□□□□ -1.86
YLR400WYLR400W SGN1P40561 250 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
YLR400WYLR400W IRC7P43623 340 aa3.44□□□□□ -1.86
YLR400WYLR400W RAD33Q04231 177 aa3.44□□□□□ -1.86
YLR400WYLR400W RPC11Q04307 110 aaPredicted RBP3.44□□□□□ -1.86
YLR400WYLR400W ECM22Q05958 814 aaPredicted RBP3.44□□□□□ -1.86
YLR400WYLR400W CRN1Q06440 651 aa3.44□□□□□ -1.86
YLR400WYLR400W CRT10Q08226 957 aa3.44□□□□□ -1.86
YLR400WYLR400W AHA1Q12449 350 aaKnown RBP3.44□□□□□ -1.86
YLR400WYLR400W YPT1P01123 206 aaKnown RBP3.43□□□□□ -1.86
YLR400WYLR400W SES1P07284 462 aaKnown RBP3.43□□□□□ -1.86
YLR400WYLR400W RRP43P25359 394 aaPredicted RBP3.43□□□□□ -1.86
YLR400WYLR400W PEP3P27801 918 aa3.43□□□□□ -1.86
YLR400WYLR400W MGM1P32266 881 aa3.43□□□□□ -1.86
YLR400WYLR400W NTR2P36118 322 aaPredicted RBP3.43□□□□□ -1.86
YLR400WYLR400W AAP1P37898 856 aaKnown RBP3.43□□□□□ -1.86
YLR400WYLR400W SRP72P38688 640 aaKnown RBP3.43□□□□□ -1.86
YLR400WYLR400W APE4P38821 490 aa3.43□□□□□ -1.86
YLR400WYLR400W LNP1P38878 278 aa3.43□□□□□ -1.86
YLR400WYLR400W YIL024CP40543 189 aa3.43□□□□□ -1.86
YLR400WYLR400W CFD1P40558 293 aa3.43□□□□□ -1.86
YLR400WYLR400W RPN11P43588 306 aaKnown RBP3.43□□□□□ -1.86
YLR400WYLR400W LCL3P53153 274 aa3.43□□□□□ -1.86
YLR400WYLR400W LSC1P53598 329 aaKnown RBP3.43□□□□□ -1.86
YLR400WYLR400W YAT1P80235 687 aa3.43□□□□□ -1.86
YLR400WYLR400W HER1Q12276 1246 aa3.43□□□□□ -1.86
YLR400WYLR400W SMC6Q12749 1114 aa3.43□□□□□ -1.86
YLR400WYLR400W DFR1P07807 211 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
YLR400WYLR400W MAK32P23060 363 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms