RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C SXM1Q04175 944 aaKnown RBP4.47□□□□□ -1.69
CDC42YLR229C YLR455WQ06188 304 aa4.47□□□□□ -1.69
CDC42YLR229C BCP1Q06338 283 aa4.47□□□□□ -1.69
CDC42YLR229C RRP36Q12481 300 aaPredicted RBP4.47□□□□□ -1.69
CDC42YLR229C ATG11Q12527 1178 aa4.47□□□□□ -1.69
CDC42YLR229C MDM12Q92328 271 aa4.47□□□□□ -1.69
CDC42YLR229C PRC1P00729 532 aa4.46□□□□□ -1.7
CDC42YLR229C COX4P04037 155 aa4.46□□□□□ -1.7
CDC42YLR229C RPL24AP04449 155 aaKnown RBP4.46□□□□□ -1.7
CDC42YLR229C EXO70P19658 623 aa4.46□□□□□ -1.7
CDC42YLR229C AEP2P22136 580 aa4.46□□□□□ -1.7
CDC42YLR229C TRX1P22217 103 aaKnown RBP4.46□□□□□ -1.7
CDC42YLR229C DPB2P24482 689 aaPredicted RBP4.46□□□□□ -1.7
CDC42YLR229C GPI10P30777 616 aa4.46□□□□□ -1.7
CDC42YLR229C MSS51P32335 436 aa4.46□□□□□ -1.7
CDC42YLR229C YMC2P38087 329 aa4.46□□□□□ -1.7
CDC42YLR229C PCM1P38628 557 aaKnown RBP4.46□□□□□ -1.7
CDC42YLR229C YHR054CP38780 354 aa4.46□□□□□ -1.7
CDC42YLR229C CRP1P38845 465 aaKnown RBP4.46□□□□□ -1.7
CDC42YLR229C DOT6P40059 670 aaKnown RBP4.46□□□□□ -1.7
CDC42YLR229C CAB2P40506 365 aa4.46□□□□□ -1.7
CDC42YLR229C SNZ3P43545 298 aa4.46□□□□□ -1.7
CDC42YLR229C LAM5P43560 674 aa4.46□□□□□ -1.7
CDC42YLR229C SAD1P43589 448 aa4.46□□□□□ -1.7
CDC42YLR229C ZAP1P47043 880 aa4.46□□□□□ -1.7
CDC42YLR229C MND1P53102 219 aa4.46□□□□□ -1.7
CDC42YLR229C YGL108CP53139 140 aa4.46□□□□□ -1.7
CDC42YLR229C LSG1P53145 640 aaKnown RBP4.46□□□□□ -1.7
CDC42YLR229C GTF1P53260 183 aaPredicted RBP4.46□□□□□ -1.7
CDC42YLR229C LSC1P53598 329 aaKnown RBP4.46□□□□□ -1.7
CDC42YLR229C SNZ2P53824 298 aa4.46□□□□□ -1.7
CDC42YLR229C DAK1P54838 584 aaKnown RBP4.46□□□□□ -1.7
CDC42YLR229C RPM2Q02773 1202 aa4.46□□□□□ -1.7
CDC42YLR229C CWC21Q03375 135 aaKnown RBP4.46□□□□□ -1.7
CDC42YLR229C RSC3Q06639 885 aa4.46□□□□□ -1.7
CDC42YLR229C ADY3Q07732 790 aa4.46□□□□□ -1.7
CDC42YLR229C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
CDC42YLR229C GET4Q12125 312 aa4.46□□□□□ -1.7
CDC42YLR229C PCD1Q12524 340 aa4.46□□□□□ -1.7
CDC42YLR229C RAD10P06838 210 aa4.45□□□□□ -1.7
CDC42YLR229C CBF1P17106 351 aa4.45□□□□□ -1.7
CDC42YLR229C GLN3P18494 730 aa4.45□□□□□ -1.7
CDC42YLR229C CYS3P31373 394 aaKnown RBP4.45□□□□□ -1.7
CDC42YLR229C MRP4P32902 394 aa4.45□□□□□ -1.7
CDC42YLR229C HES1P35843 434 aa4.45□□□□□ -1.7
CDC42YLR229C CUE2P36075 443 aaKnown RBP4.45□□□□□ -1.7
CDC42YLR229C YBR032WP38223 100 aa4.45□□□□□ -1.7
CDC42YLR229C SWC5P38326 303 aa4.45□□□□□ -1.7
CDC42YLR229C KHA1P40309 873 aa4.45□□□□□ -1.7
CDC42YLR229C ARG2P40360 574 aa4.45□□□□□ -1.7
CDC42YLR229C TMA108P40462 946 aa4.45□□□□□ -1.7
CDC42YLR229C MND2P40577 368 aa4.45□□□□□ -1.7
CDC42YLR229C YRB1P41920 201 aaKnown RBP4.45□□□□□ -1.7
CDC42YLR229C SKP2P42843 763 aa4.45□□□□□ -1.7
CDC42YLR229C ALY2P47029 1046 aa4.45□□□□□ -1.7
CDC42YLR229C YJR054WP47114 497 aa4.45□□□□□ -1.7
CDC42YLR229C IST1P53843 298 aaPredicted RBP4.45□□□□□ -1.7
CDC42YLR229C MRPL22P53881 309 aa4.45□□□□□ -1.7
CDC42YLR229C ALG11P53954 548 aaKnown RBP4.45□□□□□ -1.7
CDC42YLR229C YKR005CQ02203 525 aa4.45□□□□□ -1.7
CDC42YLR229C MZM1Q03429 123 aaPredicted RBP4.45□□□□□ -1.7
CDC42YLR229C ROT1Q03691 256 aa4.45□□□□□ -1.7
CDC42YLR229C FMN1Q03778 218 aa4.45□□□□□ -1.7
CDC42YLR229C PRM6Q04705 352 aa4.45□□□□□ -1.7
CDC42YLR229C THI7Q05998 598 aa4.45□□□□□ -1.7
CDC42YLR229C KAP95Q06142 861 aaKnown RBP4.45□□□□□ -1.7
CDC42YLR229C YOR389WQ08912 624 aa4.45□□□□□ -1.7
CDC42YLR229C ICL2Q12031 575 aa4.45□□□□□ -1.7
CDC42YLR229C YPR027CQ12079 277 aa4.45□□□□□ -1.7
CDC42YLR229C YDR018CQ12185 396 aa4.45□□□□□ -1.7
CDC42YLR229C RIB2Q12362 591 aaKnown RBP4.45□□□□□ -1.7
CDC42YLR229C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
CDC42YLR229C DIF1O13577 133 aa4.44□□□□□ -1.7
CDC42YLR229C CMD1P06787 147 aaKnown RBP4.44□□□□□ -1.7
CDC42YLR229C CHS1P08004 1131 aa4.44□□□□□ -1.7
CDC42YLR229C SPE1P08432 466 aa4.44□□□□□ -1.7
CDC42YLR229C PUT4P15380 627 aa4.44□□□□□ -1.7
CDC42YLR229C HEM15P16622 393 aa4.44□□□□□ -1.7
CDC42YLR229C SLY1P22213 666 aa4.44□□□□□ -1.7
CDC42YLR229C AAD3P25612 363 aa4.44□□□□□ -1.7
CDC42YLR229C MGT1P26188 188 aa4.44□□□□□ -1.7
CDC42YLR229C RPS5P26783 225 aaKnown RBP4.44□□□□□ -1.7
CDC42YLR229C SEC1P30619 724 aaKnown RBP4.44□□□□□ -1.7
CDC42YLR229C RAD16P31244 790 aa4.44□□□□□ -1.7
CDC42YLR229C AST1P35183 429 aa4.44□□□□□ -1.7
CDC42YLR229C NUP120P35729 1037 aa4.44□□□□□ -1.7
CDC42YLR229C SRL3P36167 246 aa4.44□□□□□ -1.7
CDC42YLR229C ABZ1P37254 787 aaPredicted RBP4.44□□□□□ -1.7
CDC42YLR229C DUG2P38149 878 aa4.44□□□□□ -1.7
CDC42YLR229C YER186CP40101 306 aa4.44□□□□□ -1.7
CDC42YLR229C RBL2P48606 106 aaKnown RBP4.44□□□□□ -1.7
CDC42YLR229C RNR4P49723 345 aaKnown RBP4.44□□□□□ -1.7
CDC42YLR229C MAL11P53048 616 aa4.44□□□□□ -1.7
CDC42YLR229C YGR016WP53209 190 aa4.44□□□□□ -1.7
CDC42YLR229C RCF2P53721 224 aa4.44□□□□□ -1.7
CDC42YLR229C YNL247WP53852 767 aaKnown RBP4.44□□□□□ -1.7
CDC42YLR229C NOP13P53883 403 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
CDC42YLR229C CIK1Q01649 594 aa4.44□□□□□ -1.7
CDC42YLR229C YKR011CQ02209 353 aa4.44□□□□□ -1.7
CDC42YLR229C ACL4Q03771 387 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms