RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	YJR141W	P47172	347 aa	Predicted RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	YGR237C	P50089	785 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	SNF12	P53628	566 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	ORC4	P54791	529 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	PPM1	Q04081	328 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	CSI1	Q04368	295 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	SPO77	Q06134	477 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	DIS3	Q08162	1001 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	VPS54	Q12071	889 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	IES3	Q12345	250 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	SEY1	Q99287	776 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	YRF1-3	P0CX14	1859 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	YRF1-7	P0CX15	1859 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	YRF1-6	P53819	1859 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	RPS17A	P02407	136 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	RPL35A	P0CX84	120 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	RPL35B	P0CX85	120 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	RPS17B	P14127	136 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	CHS2	P14180	963 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	TAL1	P15019	335 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	CDC42	P19073	191 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	PTP2	P29461	750 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	YKR015C	P36111	568 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	AKL1	P38080	1108 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	AIM3	P38266	947 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	SPP381	P38282	291 aa	Predicted RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	YHR182W	P38870	785 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	MRX1	P40050	688 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	PIG2	P40187	538 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	YMR134W	P40207	237 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	HPM1	P40481	377 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	ERG10	P41338	398 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	YJR054W	P47114	497 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	CPR6	P53691	371 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	BRE5	P53741	515 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	EAR1	Q03212	550 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	MLC2	Q06580	163 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	WRS1	Q12109	432 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	LEU9	Q12166	604 aa	Known RBP	3.45	□□□□□ -1.86
PEX1	YKL197C	MDY2	Q12285	212 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	FRE6	Q12473	712 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	YOR131C	Q12486	218 aa		3.45	□□□□□ -1.86
PEX1	YKL197C	PDX1	P16451	410 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	BAS1	P22035	811 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	PTP1	P25044	335 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	RRT12	P25381	491 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	MTH1	P35198	433 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	ELF1	P36053	145 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	MRPL7	P36519	292 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	RFT1	P38206	574 aa	Predicted RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	ECM2	P38241	364 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	SSH1	P38353	490 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	EGD2	P38879	174 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	PZF1	P39933	429 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	EMP65	P40085	556 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	ASG1	P40467	964 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	CTK3	P46963	296 aa	Predicted RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	TMA22	P47089	198 aa	Predicted RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	AMA1	P50082	593 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	SUT1	P53032	299 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	SLX9	P53251	210 aa	Predicted RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	ZRG17	P53735	605 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	YNR063W	P53749	607 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	ADE16	P54113	591 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	ACS1	Q01574	713 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	DCR2	Q05924	578 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	TOS4	Q06266	489 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	REX4	Q08237	289 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	SGO1	Q08490	590 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	TGL5	Q12043	749 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	SET6	Q12529	373 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	MLP1	Q02455	1875 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	MRP7	P12687	371 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	UNG1	P12887	359 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	FRS1	P15624	595 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	AAC3	P18238	307 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	DPB2	P24482	689 aa	Predicted RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	IMG2	P25642	146 aa	Predicted RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	ERG1	P32476	496 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	RPD3	P32561	433 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	MUD2	P36084	527 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	LAS1	P36146	502 aa	Predicted RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	UBS1	P38290	277 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	YJL068C	P40363	299 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	MPS3	P47069	682 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	LCL3	P53153	274 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	TIM21	P53220	239 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	ARC35	P53731	342 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	YNR061C	P53747	219 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	PRM1	P53835	661 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	ORC3	P54790	616 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	ARX1	Q03862	593 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	YLR455W	Q06188	304 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	NUT2	Q06213	157 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	RPN8	Q08723	338 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	RSA1	Q08932	381 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	HFI1	Q12060	488 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	YLR125W	Q12138	136 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	HOS1	Q12214	470 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	SKS1	Q12505	502 aa		3.44	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms