RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W PHO4P07270 312 aaKnown RBP4.48□□□□□ -1.69
SSH4YKL124W POL30P15873 258 aaKnown RBP4.48□□□□□ -1.69
SSH4YKL124W REC107P21651 314 aa4.48□□□□□ -1.69
SSH4YKL124W NPR1P22211 790 aa4.48□□□□□ -1.69
SSH4YKL124W RIB7P33312 244 aa4.48□□□□□ -1.69
SSH4YKL124W ALY1P36117 915 aa4.48□□□□□ -1.69
SSH4YKL124W UTH1P36135 365 aa4.48□□□□□ -1.69
SSH4YKL124W PCH2P38126 564 aa4.48□□□□□ -1.69
SSH4YKL124W YBR071WP38243 211 aa4.48□□□□□ -1.69
SSH4YKL124W MMS21P38632 267 aa4.48□□□□□ -1.69
SSH4YKL124W MSR1P38714 643 aa4.48□□□□□ -1.69
SSH4YKL124W END3P39013 349 aa4.48□□□□□ -1.69
SSH4YKL124W RSP5P39940 809 aaKnown RBP4.48□□□□□ -1.69
SSH4YKL124W ROK1P45818 564 aaPredicted RBP4.48□□□□□ -1.69
SSH4YKL124W SET2P46995 733 aaKnown RBP4.48□□□□□ -1.69
SSH4YKL124W YPR003CP53394 754 aa4.48□□□□□ -1.69
SSH4YKL124W AGE1Q04412 482 aa4.48□□□□□ -1.69
SSH4YKL124W PNP1Q05788 311 aa4.48□□□□□ -1.69
SSH4YKL124W LDB18Q07887 179 aa4.48□□□□□ -1.69
SSH4YKL124W YLR001CQ07895 862 aa4.48□□□□□ -1.69
SSH4YKL124W NRT1Q08485 598 aa4.48□□□□□ -1.69
SSH4YKL124W SRO7Q12038 1033 aa4.48□□□□□ -1.69
SSH4YKL124W APC2Q12440 853 aa4.48□□□□□ -1.69
SSH4YKL124W COX5AP00424 153 aa4.47□□□□□ -1.69
SSH4YKL124W PMA2P19657 947 aa4.47□□□□□ -1.69
SSH4YKL124W EMC1P25574 760 aa4.47□□□□□ -1.69
SSH4YKL124W PLC1P32383 869 aa4.47□□□□□ -1.69
SSH4YKL124W LRP1P38801 184 aaKnown RBP4.47□□□□□ -1.69
SSH4YKL124W RPS26AP39938 119 aaKnown RBP4.47□□□□□ -1.69
SSH4YKL124W RPS26BP39939 119 aaKnown RBP4.47□□□□□ -1.69
SSH4YKL124W TIF34P40217 347 aaKnown RBP4.47□□□□□ -1.69
SSH4YKL124W YJL070CP40361 888 aa4.47□□□□□ -1.69
SSH4YKL124W YIL166CP40445 542 aa4.47□□□□□ -1.69
SSH4YKL124W PAN6P40459 309 aa4.47□□□□□ -1.69
SSH4YKL124W TRF5P48561 642 aaKnown RBP4.47□□□□□ -1.69
SSH4YKL124W EMC4P53073 190 aa4.47□□□□□ -1.69
SSH4YKL124W COG7P53195 279 aa4.47□□□□□ -1.69
SSH4YKL124W DSL1P53847 754 aa4.47□□□□□ -1.69
SSH4YKL124W TEP1P53916 434 aa4.47□□□□□ -1.69
SSH4YKL124W SNZ1Q03148 297 aa4.47□□□□□ -1.69
SSH4YKL124W MTG1Q03151 367 aaPredicted RBP4.47□□□□□ -1.69
SSH4YKL124W YMR178WQ03219 274 aaKnown RBP4.47□□□□□ -1.69
SSH4YKL124W YDR131CQ03899 556 aa4.47□□□□□ -1.69
SSH4YKL124W OPT2Q06593 877 aa4.47□□□□□ -1.69
SSH4YKL124W VAC14Q06708 880 aa4.47□□□□□ -1.69
SSH4YKL124W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
SSH4YKL124W Q0182Q9ZZW1 134 aa4.47□□□□□ -1.69
SSH4YKL124W SUC2P00724 532 aa4.46□□□□□ -1.69
SSH4YKL124W LEU1P07264 779 aaKnown RBP4.46□□□□□ -1.69
SSH4YKL124W RPB4P20433 221 aaPredicted RBP4.46□□□□□ -1.69
SSH4YKL124W DIT1P21623 536 aa4.46□□□□□ -1.69
SSH4YKL124W ERG6P25087 383 aaKnown RBP4.46□□□□□ -1.69
SSH4YKL124W CKB2P38930 258 aa4.46□□□□□ -1.69
SSH4YKL124W RPH1P39956 796 aa4.46□□□□□ -1.69
SSH4YKL124W YAT2P40017 923 aa4.46□□□□□ -1.69
SSH4YKL124W YTA6P40328 754 aa4.46□□□□□ -1.69
SSH4YKL124W DSN1P40568 576 aa4.46□□□□□ -1.69
SSH4YKL124W MDE1P47095 244 aa4.46□□□□□ -1.69
SSH4YKL124W MNN10P50108 393 aaKnown RBP4.46□□□□□ -1.69
SSH4YKL124W PCL10P53124 433 aa4.46□□□□□ -1.69
SSH4YKL124W TYW3P53177 273 aa4.46□□□□□ -1.69
SSH4YKL124W GND2P53319 492 aa4.46□□□□□ -1.69
SSH4YKL124W YNL143CP53908 130 aa4.46□□□□□ -1.69
SSH4YKL124W SIW14P53965 281 aa4.46□□□□□ -1.69
SSH4YKL124W CDC14Q00684 551 aa4.46□□□□□ -1.69
SSH4YKL124W NAN1Q02931 896 aaKnown RBP4.46□□□□□ -1.69
SSH4YKL124W RPC11Q04307 110 aaPredicted RBP4.46□□□□□ -1.69
SSH4YKL124W ATG38Q05789 226 aaKnown RBP4.46□□□□□ -1.69
SSH4YKL124W ESC2Q06340 456 aa4.46□□□□□ -1.69
SSH4YKL124W HBT1Q07653 1046 aaKnown RBP4.46□□□□□ -1.69
SSH4YKL124W RPN8Q08723 338 aaKnown RBP4.46□□□□□ -1.69
SSH4YKL124W GNT1Q12096 491 aa4.46□□□□□ -1.69
SSH4YKL124W AVL9Q12500 764 aa4.46□□□□□ -1.69
SSH4YKL124W NAG1Q8TGN9 163 aa4.46□□□□□ -1.69
SSH4YKL124W AI5_ALPHAQ9ZZX1 630 aa4.46□□□□□ -1.69
SSH4YKL124W UBR1P19812 1950 aa4.46□□□□□ -1.7
SSH4YKL124W RPC40P07703 335 aaKnown RBP4.46□□□□□ -1.7
SSH4YKL124W ACO1P19414 778 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
SSH4YKL124W PRI2P20457 528 aa4.46□□□□□ -1.7
SSH4YKL124W PMI40P29952 429 aaKnown RBP4.46□□□□□ -1.7
SSH4YKL124W DBF20P32328 564 aa4.46□□□□□ -1.7
SSH4YKL124W HEM12P32347 362 aaPredicted RBP4.46□□□□□ -1.7
SSH4YKL124W ACP1P32463 125 aa4.46□□□□□ -1.7
SSH4YKL124W AEP1P32493 518 aa4.46□□□□□ -1.7
SSH4YKL124W PET112P33893 541 aa4.46□□□□□ -1.7
SSH4YKL124W PTH2P34222 208 aa4.46□□□□□ -1.7
SSH4YKL124W SCD5P34758 872 aa4.46□□□□□ -1.7
SSH4YKL124W YKL069WP36088 180 aa4.46□□□□□ -1.7
SSH4YKL124W STN1P38960 494 aa4.46□□□□□ -1.7
SSH4YKL124W CCT6P39079 546 aa4.46□□□□□ -1.7
SSH4YKL124W SPF1P39986 1215 aaKnown RBP4.46□□□□□ -1.7
SSH4YKL124W MKT1P40850 830 aaKnown RBP4.46□□□□□ -1.7
SSH4YKL124W SWS2P53937 143 aa4.46□□□□□ -1.7
SSH4YKL124W BOP3P53958 396 aa4.46□□□□□ -1.7
SSH4YKL124W RSC4Q02206 625 aa4.46□□□□□ -1.7
SSH4YKL124W RLI1Q03195 608 aaKnown RBP4.46□□□□□ -1.7
SSH4YKL124W TRM82Q03774 444 aa4.46□□□□□ -1.7
SSH4YKL124W ARP9Q05123 467 aa4.46□□□□□ -1.7
SSH4YKL124W TGL5Q12043 749 aa4.46□□□□□ -1.7
SSH4YKL124W RTK1Q12100 620 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms