RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C PHM8P40025 321 aa3.62□□□□□ -1.83
ATG27YJL178C SAP185P40856 1058 aa3.62□□□□□ -1.83
ATG27YJL178C YJL107CP42947 387 aa3.62□□□□□ -1.83
ATG27YJL178C IRC8P47046 822 aa3.62□□□□□ -1.83
ATG27YJL178C MSY1P48527 492 aa3.62□□□□□ -1.83
ATG27YJL178C HEF3P53978 1044 aaKnown RBP3.62□□□□□ -1.83
ATG27YJL178C TAP42Q04372 366 aa3.62□□□□□ -1.83
ATG27YJL178C ATG23Q06671 453 aa3.62□□□□□ -1.83
ATG27YJL178C THI3Q07471 609 aa3.62□□□□□ -1.83
ATG27YJL178C YPT1P01123 206 aaKnown RBP3.61□□□□□ -1.83
ATG27YJL178C GAL4P04386 881 aa3.61□□□□□ -1.83
ATG27YJL178C TPK1P06244 397 aa3.61□□□□□ -1.83
ATG27YJL178C MGM1P32266 881 aa3.61□□□□□ -1.83
ATG27YJL178C ARN1P38731 627 aa3.61□□□□□ -1.83
ATG27YJL178C TPA1P40032 644 aaKnown RBP3.61□□□□□ -1.83
ATG27YJL178C DJP1P40564 432 aa3.61□□□□□ -1.83
ATG27YJL178C SMK1P41808 388 aa3.61□□□□□ -1.83
ATG27YJL178C BNA1P47096 177 aa3.61□□□□□ -1.83
ATG27YJL178C COG1P53079 417 aa3.61□□□□□ -1.83
ATG27YJL178C YGR021WP53212 290 aa3.61□□□□□ -1.83
ATG27YJL178C GTR1Q00582 310 aa3.61□□□□□ -1.83
ATG27YJL178C TFC6Q06339 672 aa3.61□□□□□ -1.83
ATG27YJL178C RTT109Q07794 436 aa3.61□□□□□ -1.83
ATG27YJL178C BAG7Q12128 409 aa3.61□□□□□ -1.83
ATG27YJL178C URB1P34241 1764 aaKnown RBP3.61□□□□□ -1.83
ATG27YJL178C TY2A-LR1P0C2J4 438 aa3.6□□□□□ -1.83
ATG27YJL178C TY2A-FP0CX61 438 aa3.6□□□□□ -1.83
ATG27YJL178C TY2A-GR2P0CX62 438 aa3.6□□□□□ -1.83
ATG27YJL178C PCT1P13259 424 aa3.6□□□□□ -1.83
ATG27YJL178C AIM17P23180 465 aaKnown RBP3.6□□□□□ -1.83
ATG27YJL178C CNA1P23287 553 aa3.6□□□□□ -1.83
ATG27YJL178C TY2A-CP25383 438 aa3.6□□□□□ -1.83
ATG27YJL178C PWP2P25635 923 aaKnown RBP3.6□□□□□ -1.83
ATG27YJL178C RPT3P33298 428 aaKnown RBP3.6□□□□□ -1.83
ATG27YJL178C MRPL36P36531 177 aa3.6□□□□□ -1.83
ATG27YJL178C NPR3P38742 1146 aa3.6□□□□□ -1.83
ATG27YJL178C FLO5P38894 1075 aa3.6□□□□□ -1.83
ATG27YJL178C RPL15BP54780 204 aaPredicted RBP3.6□□□□□ -1.83
ATG27YJL178C TY2A-DR2Q03483 438 aa3.6□□□□□ -1.83
ATG27YJL178C CSR1Q06705 408 aaKnown RBP3.6□□□□□ -1.83
ATG27YJL178C TMA16Q08687 178 aa3.6□□□□□ -1.83
ATG27YJL178C SWT1Q12104 458 aa3.6□□□□□ -1.83
ATG27YJL178C TY2A-BQ12260 438 aa3.6□□□□□ -1.83
ATG27YJL178C HER1Q12276 1246 aa3.6□□□□□ -1.83
ATG27YJL178C TY2A-OR2Q12293 438 aa3.6□□□□□ -1.83
ATG27YJL178C TY2A-DR1Q12392 438 aa3.6□□□□□ -1.83
ATG27YJL178C TY2A-OR1Q12439 438 aa3.6□□□□□ -1.83
ATG27YJL178C TY2A-DR3Q99303 438 aa3.6□□□□□ -1.83
ATG27YJL178C YRF1-4O13559 1382 aa3.6□□□□□ -1.83
ATG27YJL178C DAL5P15365 543 aa3.59□□□□□ -1.83
ATG27YJL178C YCP4P25349 247 aaKnown RBP3.59□□□□□ -1.83
ATG27YJL178C LRE1P25579 583 aaKnown RBP3.59□□□□□ -1.83
ATG27YJL178C NUP120P35729 1037 aa3.59□□□□□ -1.83
ATG27YJL178C YIL161WP40449 235 aaKnown RBP3.59□□□□□ -1.83
ATG27YJL178C CDC1P40986 491 aa3.59□□□□□ -1.83
ATG27YJL178C CTF18P49956 741 aa3.59□□□□□ -1.83
ATG27YJL178C PSP1P50896 841 aaKnown RBP3.59□□□□□ -1.83
ATG27YJL178C CSL4P53859 292 aaPredicted RBP3.59□□□□□ -1.83
ATG27YJL178C VMS1Q04311 632 aaKnown RBP3.59□□□□□ -1.83
ATG27YJL178C TRM8Q12009 286 aa3.59□□□□□ -1.83
ATG27YJL178C ATX2Q12067 313 aa3.59□□□□□ -1.83
ATG27YJL178C RRI1Q12468 440 aa3.59□□□□□ -1.83
ATG27YJL178C FKS3Q04952 1785 aa3.58□□□□□ -1.84
ATG27YJL178C TRX2P22803 104 aaKnown RBP3.58□□□□□ -1.84
ATG27YJL178C RAD16P31244 790 aa3.58□□□□□ -1.84
ATG27YJL178C OCT1P35999 772 aa3.58□□□□□ -1.84
ATG27YJL178C UBP13P38187 747 aa3.58□□□□□ -1.84
ATG27YJL178C PSY4P38193 441 aa3.58□□□□□ -1.84
ATG27YJL178C MDV1P47025 714 aa3.58□□□□□ -1.84
ATG27YJL178C DSD1P53095 428 aa3.58□□□□□ -1.84
ATG27YJL178C TDA9Q04545 1251 aa3.58□□□□□ -1.84
ATG27YJL178C PSR2Q07949 397 aa3.58□□□□□ -1.84
ATG27YJL178C RPO41P13433 1351 aaKnown RBP3.58□□□□□ -1.84
ATG27YJL178C YER145C-AA0A023PYF4 145 aa3.57□□□□□ -1.84
ATG27YJL178C SNF1P06782 633 aaKnown RBP3.57□□□□□ -1.84
ATG27YJL178C SUI3P09064 285 aaKnown RBP3.57□□□□□ -1.84
ATG27YJL178C XRS2P33301 854 aa3.57□□□□□ -1.84
ATG27YJL178C ADE17P38009 592 aaKnown RBP3.57□□□□□ -1.84
ATG27YJL178C SCO2P38072 301 aa3.57□□□□□ -1.84
ATG27YJL178C PSD1P39006 500 aa3.57□□□□□ -1.84
ATG27YJL178C ASG1P40467 964 aa3.57□□□□□ -1.84
ATG27YJL178C YNL144CP53907 740 aa3.57□□□□□ -1.84
ATG27YJL178C REG1Q00816 1014 aa3.57□□□□□ -1.84
ATG27YJL178C VID22Q05934 901 aa3.57□□□□□ -1.84
ATG27YJL178C PDR8Q06149 701 aa3.57□□□□□ -1.84
ATG27YJL178C CRN1Q06440 651 aa3.57□□□□□ -1.84
ATG27YJL178C SWA2Q06677 668 aa3.57□□□□□ -1.84
ATG27YJL178C MCH4Q08268 501 aa3.57□□□□□ -1.84
ATG27YJL178C MRP2P10663 115 aaPredicted RBP3.56□□□□□ -1.84
ATG27YJL178C GUK1P15454 187 aaKnown RBP3.56□□□□□ -1.84
ATG27YJL178C PFK2P16862 959 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
ATG27YJL178C SPO16P17122 198 aa3.56□□□□□ -1.84
ATG27YJL178C SRP54P20424 541 aaKnown RBP3.56□□□□□ -1.84
ATG27YJL178C YCR006CP25350 157 aa3.56□□□□□ -1.84
ATG27YJL178C PXL1P36166 706 aa3.56□□□□□ -1.84
ATG27YJL178C AXL2P38928 823 aa3.56□□□□□ -1.84
ATG27YJL178C YIR016WP40572 265 aa3.56□□□□□ -1.84
ATG27YJL178C YPT11P48559 417 aa3.56□□□□□ -1.84
ATG27YJL178C UBP8P50102 471 aa3.56□□□□□ -1.84
ATG27YJL178C ASE1P50275 885 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms