RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W CDC123Q05791 360 aa3.51□□□□□ -1.85
NSP1YJL041W SIL1Q08199 421 aa3.51□□□□□ -1.85
NSP1YJL041W LEA1Q08963 238 aaPredicted RBP3.51□□□□□ -1.85
NSP1YJL041W RUP1Q12242 671 aa3.51□□□□□ -1.85
NSP1YJL041W NYV1Q12255 253 aa3.51□□□□□ -1.85
NSP1YJL041W YOR111WQ99210 232 aa3.51□□□□□ -1.85
NSP1YJL041W YOS9Q99220 542 aa3.51□□□□□ -1.85
NSP1YJL041W GPA1P08539 472 aa3.5□□□□□ -1.85
NSP1YJL041W PHO8P11491 566 aa3.5□□□□□ -1.85
NSP1YJL041W ATR1P13090 542 aa3.5□□□□□ -1.85
NSP1YJL041W GLN4P13188 809 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W YAK1P14680 807 aa3.5□□□□□ -1.85
NSP1YJL041W ALG1P16661 449 aa3.5□□□□□ -1.85
NSP1YJL041W BAS1P22035 811 aa3.5□□□□□ -1.85
NSP1YJL041W CWH43P25618 953 aa3.5□□□□□ -1.85
NSP1YJL041W PET309P32522 965 aaPredicted RBP3.5□□□□□ -1.85
NSP1YJL041W GRX4P32642 244 aa3.5□□□□□ -1.85
NSP1YJL041W PIN4P34217 668 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
NSP1YJL041W MTC2P34246 357 aa3.5□□□□□ -1.85
NSP1YJL041W MDJ1P35191 511 aa3.5□□□□□ -1.85
NSP1YJL041W RPC25P35718 212 aa3.5□□□□□ -1.85
NSP1YJL041W LAS1P36146 502 aaPredicted RBP3.5□□□□□ -1.85
NSP1YJL041W YPK3P38070 525 aa3.5□□□□□ -1.85
NSP1YJL041W EXO5P38289 585 aa3.5□□□□□ -1.85
NSP1YJL041W LEU5P38702 357 aa3.5□□□□□ -1.85
NSP1YJL041W MSR1P38714 643 aa3.5□□□□□ -1.85
NSP1YJL041W RIM4P38741 713 aa3.5□□□□□ -1.85
NSP1YJL041W NAS6P50086 228 aa3.5□□□□□ -1.85
NSP1YJL041W TWF1P53250 332 aa3.5□□□□□ -1.85
NSP1YJL041W HAS1Q03532 505 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W HER2Q03557 464 aa3.5□□□□□ -1.85
NSP1YJL041W YMR027WQ04371 470 aa3.5□□□□□ -1.85
NSP1YJL041W CRR1Q05790 422 aa3.5□□□□□ -1.85
NSP1YJL041W EST2Q06163 884 aa3.5□□□□□ -1.85
NSP1YJL041W HDA2Q06629 674 aa3.5□□□□□ -1.85
NSP1YJL041W THI73Q07904 523 aa3.5□□□□□ -1.85
NSP1YJL041W SKI7Q08491 747 aaPredicted RBP3.5□□□□□ -1.85
NSP1YJL041W TMA16Q08687 178 aa3.5□□□□□ -1.85
NSP1YJL041W MUM3Q08750 479 aa3.5□□□□□ -1.85
NSP1YJL041W AEP3Q12089 606 aa3.5□□□□□ -1.85
NSP1YJL041W SBP1P10080 294 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W SGV1P23293 657 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W DBP2P24783 546 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W SED4P25365 1065 aa3.5□□□□□ -1.85
NSP1YJL041W FRD1P32614 470 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W STB6P36085 766 aa3.5□□□□□ -1.85
NSP1YJL041W AAP1P37898 856 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W AKL1P38080 1108 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W YBR238CP38330 731 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W EXO1P39875 702 aa3.5□□□□□ -1.85
NSP1YJL041W RMD6P39975 231 aa3.5□□□□□ -1.85
NSP1YJL041W MMF1P40185 145 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W PCL7P40186 285 aa3.5□□□□□ -1.85
NSP1YJL041W SHQ1P40486 507 aaPredicted RBP3.5□□□□□ -1.85
NSP1YJL041W PKP1P40530 394 aa3.5□□□□□ -1.85
NSP1YJL041W HXT9P40885 567 aa3.5□□□□□ -1.85
NSP1YJL041W LSB6P42951 607 aa3.5□□□□□ -1.85
NSP1YJL041W DUG1P43616 481 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W YGR042WP53227 271 aa3.5□□□□□ -1.85
NSP1YJL041W ZPR1P53303 486 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W SOK2P53438 785 aaPredicted RBP3.5□□□□□ -1.85
NSP1YJL041W SSU72P53538 206 aaPredicted RBP3.5□□□□□ -1.85
NSP1YJL041W ERG5P54781 538 aa3.5□□□□□ -1.85
NSP1YJL041W NGL3Q03210 505 aa3.5□□□□□ -1.85
NSP1YJL041W RMT2Q03305 412 aa3.5□□□□□ -1.85
NSP1YJL041W ENT5Q03769 411 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W BNA7Q04066 261 aa3.5□□□□□ -1.85
NSP1YJL041W UFO1Q04511 668 aa3.5□□□□□ -1.85
NSP1YJL041W IVY1Q04934 453 aa3.5□□□□□ -1.85
NSP1YJL041W GLO2Q05584 274 aa3.5□□□□□ -1.85
NSP1YJL041W TFC6Q06339 672 aa3.5□□□□□ -1.85
NSP1YJL041W THI22Q06490 572 aa3.5□□□□□ -1.85
NSP1YJL041W BRE4Q07660 1125 aa3.5□□□□□ -1.85
NSP1YJL041W YPL272CQ08984 517 aa3.5□□□□□ -1.85
NSP1YJL041W SPE3Q12074 293 aaKnown RBP3.5□□□□□ -1.85
NSP1YJL041W APC1P53886 1748 aa3.5□□□□□ -1.85
NSP1YJL041W YRF1-2P40105 1681 aa3.49□□□□□ -1.85
NSP1YJL041W GPA2P10823 449 aa3.49□□□□□ -1.85
NSP1YJL041W PFK2P16862 959 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
NSP1YJL041W RPL8AP17076 256 aaKnown RBP3.49□□□□□ -1.85
NSP1YJL041W YPK2P18961 677 aa3.49□□□□□ -1.85
NSP1YJL041W RPI1P23250 407 aaKnown RBP3.49□□□□□ -1.85
NSP1YJL041W SPS22P25380 463 aa3.49□□□□□ -1.85
NSP1YJL041W ILV6P25605 309 aaKnown RBP3.49□□□□□ -1.85
NSP1YJL041W CDC50P25656 391 aa3.49□□□□□ -1.85
NSP1YJL041W RPL8BP29453 256 aaKnown RBP3.49□□□□□ -1.85
NSP1YJL041W SEC1P30619 724 aaKnown RBP3.49□□□□□ -1.85
NSP1YJL041W PEX6P33760 1030 aa3.49□□□□□ -1.85
NSP1YJL041W JEN1P36035 616 aa3.49□□□□□ -1.85
NSP1YJL041W CST26P38226 397 aa3.49□□□□□ -1.85
NSP1YJL041W CCZ1P38273 704 aa3.49□□□□□ -1.85
NSP1YJL041W VMA7P39111 118 aa3.49□□□□□ -1.85
NSP1YJL041W TMA108P40462 946 aa3.49□□□□□ -1.85
NSP1YJL041W GAT1P43574 510 aa3.49□□□□□ -1.85
NSP1YJL041W BNA6P43619 295 aa3.49□□□□□ -1.85
NSP1YJL041W RAD17P48581 401 aa3.49□□□□□ -1.85
NSP1YJL041W SWC4P53201 476 aa3.49□□□□□ -1.85
NSP1YJL041W GTF1P53260 183 aaPredicted RBP3.49□□□□□ -1.85
NSP1YJL041W ARP4P80428 489 aa3.49□□□□□ -1.85
NSP1YJL041W ACS1Q01574 713 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms