RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W STE50P25344 346 aa3.36□□□□□ -1.87
SIZ1YDR409W PER1P25625 357 aa3.36□□□□□ -1.87
SIZ1YDR409W YJU2P28320 278 aaPredicted RBP3.36□□□□□ -1.87
SIZ1YDR409W TPS2P31688 896 aaKnown RBP3.36□□□□□ -1.87
SIZ1YDR409W TEF4P36008 412 aaKnown RBP3.36□□□□□ -1.87
SIZ1YDR409W PEX18P38855 283 aa3.36□□□□□ -1.87
SIZ1YDR409W DIM1P41819 318 aaKnown RBP3.36□□□□□ -1.87
SIZ1YDR409W LAM5P43560 674 aa3.36□□□□□ -1.87
SIZ1YDR409W SPO74P45819 413 aa3.36□□□□□ -1.87
SIZ1YDR409W BIO3P50277 480 aa3.36□□□□□ -1.87
SIZ1YDR409W SLD3P53135 668 aa3.36□□□□□ -1.87
SIZ1YDR409W NMA2P53204 395 aa3.36□□□□□ -1.87
SIZ1YDR409W UTP22P53254 1237 aaPredicted RBP3.36□□□□□ -1.87
SIZ1YDR409W BRE5P53741 515 aaKnown RBP3.36□□□□□ -1.87
SIZ1YDR409W YNR065CP53751 1116 aa3.36□□□□□ -1.87
SIZ1YDR409W YSA1Q01976 231 aa3.36□□□□□ -1.87
SIZ1YDR409W TOF2Q02208 771 aa3.36□□□□□ -1.87
SIZ1YDR409W MCP2Q06567 569 aa3.36□□□□□ -1.87
SIZ1YDR409W RUP1Q12242 671 aa3.36□□□□□ -1.87
SIZ1YDR409W RPL11AP0C0W9 174 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W LCB1P25045 558 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W RRT12P25381 491 aa3.35□□□□□ -1.87
SIZ1YDR409W BUD23P25627 275 aaPredicted RBP3.35□□□□□ -1.87
SIZ1YDR409W EFT1P32324 842 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W PET127P32606 800 aa3.35□□□□□ -1.87
SIZ1YDR409W EMC3P36039 253 aa3.35□□□□□ -1.87
SIZ1YDR409W YKR078WP36158 585 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W APM3P38153 483 aa3.35□□□□□ -1.87
SIZ1YDR409W GAA1P39012 614 aa3.35□□□□□ -1.87
SIZ1YDR409W JJJ2P46997 583 aa3.35□□□□□ -1.87
SIZ1YDR409W LIA1P47120 325 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W PTA1Q01329 785 aaPredicted RBP3.35□□□□□ -1.87
SIZ1YDR409W MUB1Q03162 620 aa3.35□□□□□ -1.87
SIZ1YDR409W YAP6Q03935 383 aa3.35□□□□□ -1.87
SIZ1YDR409W ARR1Q06596 294 aa3.35□□□□□ -1.87
SIZ1YDR409W YLL054CQ12244 843 aa3.35□□□□□ -1.87
SIZ1YDR409W SPE4Q12455 300 aa3.35□□□□□ -1.87
SIZ1YDR409W RPL11BQ3E757 174 aaPredicted RBP3.35□□□□□ -1.87
SIZ1YDR409W FKS1P38631 1876 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W SEC63P14906 663 aa3.35□□□□□ -1.87
SIZ1YDR409W GCD11P32481 527 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W GYP6P32806 458 aa3.35□□□□□ -1.87
SIZ1YDR409W ARC19P33204 171 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W DOM34P33309 386 aa3.35□□□□□ -1.87
SIZ1YDR409W SIP2P34164 415 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W UTP11P34247 250 aaPredicted RBP3.35□□□□□ -1.87
SIZ1YDR409W YKR075CP36155 307 aa3.35□□□□□ -1.87
SIZ1YDR409W FES1P38260 290 aa3.35□□□□□ -1.87
SIZ1YDR409W NTC20P38302 140 aaPredicted RBP3.35□□□□□ -1.87
SIZ1YDR409W AIM46P38885 310 aa3.35□□□□□ -1.87
SIZ1YDR409W LYS9P38999 446 aa3.35□□□□□ -1.87
SIZ1YDR409W SYG1P40528 902 aa3.35□□□□□ -1.87
SIZ1YDR409W PAN2P53010 1115 aaPredicted RBP3.35□□□□□ -1.87
SIZ1YDR409W YNR071CP53757 342 aa3.35□□□□□ -1.87
SIZ1YDR409W TMA20P89886 181 aaPredicted RBP3.35□□□□□ -1.87
SIZ1YDR409W MTD1Q02046 320 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W OAZ1Q02803 292 aa3.35□□□□□ -1.87
SIZ1YDR409W LRS4Q04087 347 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W YMR027WQ04371 470 aa3.35□□□□□ -1.87
SIZ1YDR409W DPB4Q04603 196 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W CSM3Q04659 317 aa3.35□□□□□ -1.87
SIZ1YDR409W FMP42Q04991 504 aa3.35□□□□□ -1.87
SIZ1YDR409W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
SIZ1YDR409W RRT8Q08219 342 aa3.35□□□□□ -1.87
SIZ1YDR409W GPB1Q08886 897 aa3.35□□□□□ -1.87
SIZ1YDR409W YPL260WQ08977 551 aa3.35□□□□□ -1.87
SIZ1YDR409W YPL277CQ08989 487 aa3.35□□□□□ -1.87
SIZ1YDR409W YPR027CQ12079 277 aa3.35□□□□□ -1.87
SIZ1YDR409W NMD4Q12129 218 aa3.35□□□□□ -1.87
SIZ1YDR409W HTS1P07263 546 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W TUB3P09734 445 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W CSE1P33307 960 aa3.35□□□□□ -1.87
SIZ1YDR409W SPT23P35210 1082 aa3.35□□□□□ -1.87
SIZ1YDR409W YKL023WP36103 277 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W PGM2P37012 569 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W SRP72P38688 640 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W SSZ1P38788 538 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W YMR134WP40207 237 aa3.35□□□□□ -1.87
SIZ1YDR409W ASG1P40467 964 aa3.35□□□□□ -1.87
SIZ1YDR409W LCB2P40970 561 aa3.35□□□□□ -1.87
SIZ1YDR409W YFH7P43591 353 aa3.35□□□□□ -1.87
SIZ1YDR409W RFX1P48743 811 aa3.35□□□□□ -1.87
SIZ1YDR409W MNT2P53059 558 aa3.35□□□□□ -1.87
SIZ1YDR409W NSG2P53898 299 aa3.35□□□□□ -1.87
SIZ1YDR409W ADE12P80210 433 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W FMP30Q02883 468 aa3.35□□□□□ -1.87
SIZ1YDR409W SRL4Q03085 281 aa3.35□□□□□ -1.87
SIZ1YDR409W ERB1Q04660 807 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W YPS7Q06325 596 aa3.35□□□□□ -1.87
SIZ1YDR409W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
SIZ1YDR409W YOR059CQ08448 450 aaKnown RBP3.35□□□□□ -1.87
SIZ1YDR409W SFG1Q12507 346 aa3.35□□□□□ -1.87
SIZ1YDR409W YLR149CQ99296 730 aa3.35□□□□□ -1.87
SIZ1YDR409W CET1O13297 549 aaPredicted RBP3.34□□□□□ -1.87
SIZ1YDR409W ARG80P07249 177 aa3.34□□□□□ -1.87
SIZ1YDR409W RPC40P07703 335 aaKnown RBP3.34□□□□□ -1.87
SIZ1YDR409W RPP1BP10622 106 aaKnown RBP3.34□□□□□ -1.87
SIZ1YDR409W ATR1P13090 542 aa3.34□□□□□ -1.87
SIZ1YDR409W FUR1P18562 216 aaKnown RBP3.34□□□□□ -1.87
SIZ1YDR409W AFT1P22149 690 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms