RNA–Protein interactions for RNA: YDR135C

YCF1, Transcript of Vacuolar glutathione S-conjugate transporter, yeast

Gene YCF1, Length 4,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCF1	YDR135C	BIO3	P50277	480 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	ENA2	Q01896	1091 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	NGL2	Q03264	515 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	ECM30	Q06673	1274 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	MUM3	Q08750	479 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	ENA5	Q12691	1091 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	LSO2	Q3E772	92 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	RGS2	Q99188	309 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	ECM3	Q99252	613 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
YCF1	YDR135C	RED1	P14291	827 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	CLN2	P20438	545 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	CHA1	P25379	360 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	ATG22	P25568	528 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	MRP4	P32902	394 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	LRG1	P35688	1017 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	HLJ1	P48353	224 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	TRS130	Q03660	1102 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	GMC2	Q06201	188 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	IRC3	Q06683	689 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	MDM36	Q06820	579 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	IWR1	Q07532	353 aa	Predicted RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	KEL3	Q08979	651 aa	Predicted RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	WRS1	Q12109	432 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	DBF2	P22204	572 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	TRX1	P22217	103 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	YCL049C	P25577	312 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	UBC8	P28263	218 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	VMA8	P32610	256 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	RFS1	P38234	210 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	LEU5	P38702	357 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	DDI1	P40087	428 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	YER186C	P40101	306 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	DIA3	P52290	468 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	COG1	P53079	417 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	SLD3	P53135	668 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	MRH4	P53166	561 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	SCW11	P53189	542 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	CUS2	P53830	285 aa	Predicted RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	GAS3	Q03655	524 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	DIS3	Q08162	1001 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	ATG31	Q12421	196 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	IPP1	P00817	287 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	RIP-Chip
YCF1	YDR135C	MET16	P18408	261 aa	Predicted RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	DAP2	P18962	818 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	CLB3	P24870	427 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	GIT1	P25346	518 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	DMC1	P25453	334 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	NDI1	P32340	513 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	NGG1	P32494	702 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	ROT2	P38138	954 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	MTW1	P39731	289 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	CCT7	P42943	550 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	ASG7	P46993	209 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	SOL4	P53315	255 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	YLR326W	Q06170	240 aa	Known RBP	4.07	□□□□□ -1.76
YCF1	YDR135C	HUA2	Q12134	243 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	RTR2	Q12378	196 aa		4.07	□□□□□ -1.76
YCF1	YDR135C	CDC31	P06704	161 aa	Known RBP	4.06	□□□□□ -1.76
YCF1	YDR135C	BCY1	P07278	416 aa	Known RBP	4.06	□□□□□ -1.76
YCF1	YDR135C	SEC1	P30619	724 aa	Known RBP	4.06	□□□□□ -1.76
YCF1	YDR135C	ATP3	P38077	311 aa	Known RBP	4.06	□□□□□ -1.76
YCF1	YDR135C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YCF1	YDR135C	IRC18	P47056	224 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	NAS6	P50086	228 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	ALT1	P52893	592 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	YNL095C	P53932	642 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	ESA1	Q08649	445 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	CNB1	P25296	175 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	GID7	P25569	745 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	CSM1	P25651	190 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	LST4	P34239	828 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	NAT2	P37293	288 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	IPT1	P38954	527 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	SET4	P42948	560 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	IML2	P47031	731 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	STB4	P50104	949 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	SNF12	P53628	566 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	YDR249C	Q03787	373 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	HDA3	Q06623	655 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	RSC58	Q07979	502 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	YOR059C	Q08448	450 aa	Known RBP	4.06	□□□□□ -1.76
YCF1	YDR135C	YOR012W	Q12351	137 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	TRM10	Q12400	293 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	BAR1	P12630	587 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	RPL8A	P17076	256 aa	Known RBP	4.06	□□□□□ -1.76
YCF1	YDR135C	PRE8	P23639	250 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	YDJ1	P25491	409 aa	Known RBP	4.06	□□□□□ -1.76
YCF1	YDR135C	APE2	P32454	952 aa	Known RBP	4.06	□□□□□ -1.76
YCF1	YDR135C	TOM20	P35180	183 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	SLX1	P38324	304 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	BZZ1	P38822	633 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	CYC2	P38909	366 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	SHU2	P38957	223 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	TPN1	P53099	579 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	BSC5	P53755	489 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	CAF40	P53829	373 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	YPL107W	Q02873	248 aa		4.06	□□□□□ -1.76
YCF1	YDR135C	OYE2	Q03558	400 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms