RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W POL4P25615 582 aa6.14□□□□□ -1.43
TRP1YDR007W GDA1P32621 518 aa6.14□□□□□ -1.43
TRP1YDR007W AUR1P36107 401 aaPredicted RBP6.14□□□□□ -1.43
TRP1YDR007W YMC2P38087 329 aa6.14□□□□□ -1.43
TRP1YDR007W RKM3P38222 552 aa6.14□□□□□ -1.43
TRP1YDR007W GPD2P41911 440 aaKnown RBP6.14□□□□□ -1.43
TRP1YDR007W MSE1P48525 536 aa6.14□□□□□ -1.43
TRP1YDR007W MSY1P48527 492 aa6.14□□□□□ -1.43
TRP1YDR007W GLO1P50107 326 aa6.14□□□□□ -1.43
TRP1YDR007W DCP2P53550 970 aaKnown RBP6.14□□□□□ -1.43
TRP1YDR007W AAT1Q01802 451 aa6.14□□□□□ -1.43
TRP1YDR007W TIM44Q01852 431 aa6.14□□□□□ -1.43
TRP1YDR007W MRS2Q01926 470 aa6.14□□□□□ -1.43
TRP1YDR007W ERV41Q04651 352 aa6.14□□□□□ -1.43
TRP1YDR007W SWA2Q06677 668 aa6.14□□□□□ -1.43
TRP1YDR007W LCB4Q12246 624 aa6.14□□□□□ -1.43
TRP1YDR007W SEC39Q12745 709 aa6.14□□□□□ -1.43
TRP1YDR007W NUP157P40064 1391 aaKnown RBP6.14□□□□□ -1.43
TRP1YDR007W SNT2P53127 1403 aa6.14□□□□□ -1.43
TRP1YDR007W ULS1Q08562 1619 aa6.14□□□□□ -1.43
TRP1YDR007W CBS1P14066 229 aa6.13□□□□□ -1.43
TRP1YDR007W KAR3P17119 729 aa6.13□□□□□ -1.43
TRP1YDR007W LAC1P28496 418 aa6.13□□□□□ -1.43
TRP1YDR007W YKL050CP35736 922 aa6.13□□□□□ -1.43
TRP1YDR007W SWH1P35845 1188 aa6.13□□□□□ -1.43
TRP1YDR007W RIO2P40160 425 aaKnown RBP6.13□□□□□ -1.43
TRP1YDR007W SEC24P40482 926 aaKnown RBP6.13□□□□□ -1.43
TRP1YDR007W CCT7P42943 550 aaKnown RBP6.13□□□□□ -1.43
TRP1YDR007W STU2P46675 888 aa6.13□□□□□ -1.43
TRP1YDR007W YGL036WP53185 909 aaPredicted RBP6.13□□□□□ -1.43
TRP1YDR007W SUN4P53616 420 aa6.13□□□□□ -1.43
TRP1YDR007W YAT1P80235 687 aa6.13□□□□□ -1.43
TRP1YDR007W TLG1Q03322 224 aa6.13□□□□□ -1.43
TRP1YDR007W WAR1Q03631 944 aa6.13□□□□□ -1.43
TRP1YDR007W YPL191CQ08930 360 aa6.13□□□□□ -1.43
TRP1YDR007W APL5Q08951 932 aaKnown RBP6.13□□□□□ -1.43
TRP1YDR007W YSP3P25036 478 aa6.12□□□□□ -1.43
TRP1YDR007W LCB1P25045 558 aaKnown RBP6.12□□□□□ -1.43
TRP1YDR007W VMA8P32610 256 aaKnown RBP6.12□□□□□ -1.43
TRP1YDR007W PDR5P33302 1511 aaKnown RBP6.12□□□□□ -1.43
TRP1YDR007W PXA2P34230 853 aa6.12□□□□□ -1.43
TRP1YDR007W MTH1P35198 433 aa6.12□□□□□ -1.43
TRP1YDR007W BLI1P35727 113 aa6.12□□□□□ -1.43
TRP1YDR007W REG2P38232 338 aa6.12□□□□□ -1.43
TRP1YDR007W VBA2P38358 474 aaKnown RBP6.12□□□□□ -1.43
TRP1YDR007W MIT1P40002 666 aa6.12□□□□□ -1.43
TRP1YDR007W RGI2P40188 164 aa6.12□□□□□ -1.43
TRP1YDR007W STB4P50104 949 aa6.12□□□□□ -1.43
TRP1YDR007W CPR8P53728 308 aa6.12□□□□□ -1.43
TRP1YDR007W PDS5Q04264 1277 aa6.12□□□□□ -1.43
TRP1YDR007W PLM2Q04383 521 aa6.12□□□□□ -1.43
TRP1YDR007W ESC8Q08119 714 aa6.12□□□□□ -1.43
TRP1YDR007W GPN2Q08726 347 aaPredicted RBP6.12□□□□□ -1.43
TRP1YDR007W TAF3Q12297 353 aa6.12□□□□□ -1.43
TRP1YDR007W AHA1Q12449 350 aaKnown RBP6.12□□□□□ -1.43
TRP1YDR007W TY1B-JR2P47100 1755 aaKnown RBP6.11□□□□□ -1.43
TRP1YDR007W TY1B-ER2Q03619 1755 aa6.11□□□□□ -1.43
TRP1YDR007W TY1B-MR1Q04214 1755 aa6.11□□□□□ -1.43
TRP1YDR007W TY1B-MR2Q04670 1755 aaKnown RBP6.11□□□□□ -1.43
TRP1YDR007W TY1B-LR1Q12088 1755 aaKnown RBP6.11□□□□□ -1.43
TRP1YDR007W TY1B-NL1Q12112 1755 aa6.11□□□□□ -1.43
TRP1YDR007W TY1B-GR1Q12141 1755 aa6.11□□□□□ -1.43
TRP1YDR007W TY1B-BLQ12490 1755 aa6.11□□□□□ -1.43
TRP1YDR007W TPK2P06245 380 aa6.11□□□□□ -1.43
TRP1YDR007W HOM3P10869 527 aa6.11□□□□□ -1.43
TRP1YDR007W ERG3P32353 365 aa6.11□□□□□ -1.43
TRP1YDR007W AGP2P38090 596 aa6.11□□□□□ -1.43
TRP1YDR007W RTT107P38850 1070 aa6.11□□□□□ -1.43
TRP1YDR007W GIP4P39732 760 aa6.11□□□□□ -1.43
TRP1YDR007W SAP1P39955 897 aaKnown RBP6.11□□□□□ -1.43
TRP1YDR007W SWP82P43554 623 aa6.11□□□□□ -1.43
TRP1YDR007W RSC1P53236 928 aa6.11□□□□□ -1.43
TRP1YDR007W PXR1P53335 271 aaPredicted RBP6.11□□□□□ -1.43
TRP1YDR007W ADE16P54113 591 aaKnown RBP6.11□□□□□ -1.43
TRP1YDR007W YMR155WQ03795 547 aa6.11□□□□□ -1.43
TRP1YDR007W RAD33Q04231 177 aa6.11□□□□□ -1.43
TRP1YDR007W PSR1Q07800 427 aa6.11□□□□□ -1.43
TRP1YDR007W GRC3Q07845 632 aa6.11□□□□□ -1.43
TRP1YDR007W SNU66Q12420 587 aaPredicted RBP6.11□□□□□ -1.43
TRP1YDR007W ESC1Q03661 1658 aaKnown RBP6.1□□□□□ -1.43
TRP1YDR007W MET5P47169 1442 aa6.1□□□□□ -1.43
TRP1YDR007W CDC43P18898 376 aa6.1□□□□□ -1.43
TRP1YDR007W KIN3P22209 435 aa6.1□□□□□ -1.43
TRP1YDR007W KES1P35844 434 aaKnown RBP6.1□□□□□ -1.43
TRP1YDR007W MIC60P36112 540 aa6.1□□□□□ -1.43
TRP1YDR007W NTR2P36118 322 aaPredicted RBP6.1□□□□□ -1.43
TRP1YDR007W UBP13P38187 747 aa6.1□□□□□ -1.43
TRP1YDR007W LYS4P49367 693 aaPredicted RBP6.1□□□□□ -1.43
TRP1YDR007W YGL117WP53133 265 aa6.1□□□□□ -1.43
TRP1YDR007W LCL3P53153 274 aa6.1□□□□□ -1.43
TRP1YDR007W INA17Q02888 182 aa6.1□□□□□ -1.43
TRP1YDR007W YML037CQ03703 340 aa6.1□□□□□ -1.43
TRP1YDR007W YEH1Q07804 573 aa6.1□□□□□ -1.43
TRP1YDR007W PCL8Q08966 492 aa6.1□□□□□ -1.43
TRP1YDR007W HIF1Q12373 385 aa6.1□□□□□ -1.43
TRP1YDR007W RTN2Q12443 393 aa6.1□□□□□ -1.43
TRP1YDR007W PGA3Q12746 312 aaKnown RBP6.1□□□□□ -1.43
TRP1YDR007W Q0010Q9ZZX9 128 aa6.1□□□□□ -1.43
TRP1YDR007W RRP43P25359 394 aaPredicted RBP6.09□□□□□ -1.43
TRP1YDR007W PDB1P32473 366 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms