RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W APE1P14904 514 aa3.87□□□□□ -1.79
TSR1YDL060W MTC7P32633 139 aa3.87□□□□□ -1.79
TSR1YDL060W CTR1P49573 406 aa3.87□□□□□ -1.79
TSR1YDL060W ART5P53244 586 aaKnown RBP3.87□□□□□ -1.79
TSR1YDL060W SQS1P53866 767 aaKnown RBP3.87□□□□□ -1.79
TSR1YDL060W YNL050CP53952 270 aa3.87□□□□□ -1.79
TSR1YDL060W RAD30Q04049 632 aa3.87□□□□□ -1.79
TSR1YDL060W ERB1Q04660 807 aaKnown RBP3.87□□□□□ -1.79
TSR1YDL060W KEL3Q08979 651 aaPredicted RBP3.87□□□□□ -1.79
TSR1YDL060W NMD4Q12129 218 aa3.87□□□□□ -1.79
TSR1YDL060W NBP2Q12163 236 aa3.87□□□□□ -1.79
TSR1YDL060W GRX6Q12438 231 aa3.87□□□□□ -1.79
TSR1YDL060W VMR1P38735 1592 aa3.87□□□□□ -1.79
TSR1YDL060W RPB2P08518 1224 aaKnown RBP3.87□□□□□ -1.79
TSR1YDL060W BIK1P11709 440 aa3.87□□□□□ -1.79
TSR1YDL060W FRS1P15624 595 aaKnown RBP3.87□□□□□ -1.79
TSR1YDL060W THR1P17423 357 aaKnown RBP3.87□□□□□ -1.79
TSR1YDL060W OCA4P25366 362 aa3.87□□□□□ -1.79
TSR1YDL060W PET127P32606 800 aa3.87□□□□□ -1.79
TSR1YDL060W SRO77P38163 1010 aa3.87□□□□□ -1.79
TSR1YDL060W FMO1P38866 432 aa3.87□□□□□ -1.79
TSR1YDL060W YHR218WP38899 603 aa3.87□□□□□ -1.79
TSR1YDL060W ARG2P40360 574 aa3.87□□□□□ -1.79
TSR1YDL060W PAN2P53010 1115 aaPredicted RBP3.87□□□□□ -1.79
TSR1YDL060W OAZ1Q02803 292 aa3.87□□□□□ -1.79
TSR1YDL060W CMS1Q07897 291 aaKnown RBP3.87□□□□□ -1.79
TSR1YDL060W TMA16Q08687 178 aa3.87□□□□□ -1.79
TSR1YDL060W FRE6Q12473 712 aa3.87□□□□□ -1.79
TSR1YDL060W RTC1Q08281 1341 aa3.86□□□□□ -1.79
TSR1YDL060W KRE5P22023 1365 aa3.86□□□□□ -1.79
TSR1YDL060W KRS1P15180 591 aaKnown RBP3.86□□□□□ -1.79
TSR1YDL060W PET123P17558 318 aa3.86□□□□□ -1.79
TSR1YDL060W RNR1P21524 888 aaKnown RBP3.86□□□□□ -1.79
TSR1YDL060W PRD1P25375 712 aa3.86□□□□□ -1.79
TSR1YDL060W HSP104P31539 908 aaKnown RBP3.86□□□□□ -1.79
TSR1YDL060W ZUO1P32527 433 aaKnown RBP3.86□□□□□ -1.79
TSR1YDL060W CBF5P33322 483 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
TSR1YDL060W STB6P36085 766 aa3.86□□□□□ -1.79
TSR1YDL060W TDP1P38319 544 aa3.86□□□□□ -1.79
TSR1YDL060W FLC2P39719 783 aa3.86□□□□□ -1.79
TSR1YDL060W YEL057CP39983 233 aa3.86□□□□□ -1.79
TSR1YDL060W GID8P40208 455 aa3.86□□□□□ -1.79
TSR1YDL060W NDC80P40460 691 aa3.86□□□□□ -1.79
TSR1YDL060W IAH1P41734 238 aa3.86□□□□□ -1.79
TSR1YDL060W GSM1P42950 618 aa3.86□□□□□ -1.79
TSR1YDL060W MDR1P53258 950 aa3.86□□□□□ -1.79
TSR1YDL060W REG1Q00816 1014 aa3.86□□□□□ -1.79
TSR1YDL060W SPO19Q03029 223 aa3.86□□□□□ -1.79
TSR1YDL060W ECM22Q05958 814 aaPredicted RBP3.86□□□□□ -1.79
TSR1YDL060W SKG3Q06315 1026 aa3.86□□□□□ -1.79
TSR1YDL060W RCN2Q12044 265 aa3.86□□□□□ -1.79
TSR1YDL060W PDR18P53756 1333 aa3.86□□□□□ -1.79
TSR1YDL060W RAV1P47104 1357 aa3.86□□□□□ -1.79
TSR1YDL060W PET111P08468 800 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-LR1P0C2J4 438 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-FP0CX61 438 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-GR2P0CX62 438 aa3.85□□□□□ -1.79
TSR1YDL060W PYC1P11154 1178 aaKnown RBP3.85□□□□□ -1.79
TSR1YDL060W CBS1P14066 229 aa3.85□□□□□ -1.79
TSR1YDL060W SEC15P22224 910 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-CP25383 438 aa3.85□□□□□ -1.79
TSR1YDL060W CAP1P28495 268 aaKnown RBP3.85□□□□□ -1.79
TSR1YDL060W RPN2P32565 945 aaKnown RBP3.85□□□□□ -1.79
TSR1YDL060W GLG1P36143 616 aa3.85□□□□□ -1.79
TSR1YDL060W YBL029WP38201 376 aa3.85□□□□□ -1.79
TSR1YDL060W FTH1P38310 465 aa3.85□□□□□ -1.79
TSR1YDL060W YJL206CP39529 758 aa3.85□□□□□ -1.79
TSR1YDL060W IST3P40565 148 aaPredicted RBP3.85□□□□□ -1.79
TSR1YDL060W PXA1P41909 870 aa3.85□□□□□ -1.79
TSR1YDL060W TAH11P47112 604 aa3.85□□□□□ -1.79
TSR1YDL060W OCA1P50946 238 aaPredicted RBP3.85□□□□□ -1.79
TSR1YDL060W BET4Q00618 327 aa3.85□□□□□ -1.79
TSR1YDL060W YPL107WQ02873 248 aa3.85□□□□□ -1.79
TSR1YDL060W ATG21Q02887 496 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-DR2Q03483 438 aa3.85□□□□□ -1.79
TSR1YDL060W VPS36Q06696 566 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-BQ12260 438 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-OR2Q12293 438 aa3.85□□□□□ -1.79
TSR1YDL060W SUL2Q12325 893 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-DR1Q12392 438 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-OR1Q12439 438 aa3.85□□□□□ -1.79
TSR1YDL060W TY2A-DR3Q99303 438 aa3.85□□□□□ -1.79
TSR1YDL060W HRP1Q99383 534 aaKnown RBP3.85□□□□□ -1.79
TSR1YDL060W YRF1-1P0CX20 1796 aa3.85□□□□□ -1.79
TSR1YDL060W YRF1-5P0CX21 1796 aa3.85□□□□□ -1.79
TSR1YDL060W YRF1-8P0CX22 1796 aa3.85□□□□□ -1.79
TSR1YDL060W PRP16P15938 1071 aaPredicted RBP3.85□□□□□ -1.79
TSR1YDL060W POT1P27796 417 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
TSR1YDL060W PSO2P30620 661 aa3.85□□□□□ -1.79
TSR1YDL060W PRE4P30657 266 aa3.85□□□□□ -1.79
TSR1YDL060W LYS9P38999 446 aa3.85□□□□□ -1.79
TSR1YDL060W VID30P53076 958 aa3.85□□□□□ -1.79
TSR1YDL060W SMX3P54999 86 aaPredicted RBP3.85□□□□□ -1.79
TSR1YDL060W USO1P25386 1790 aa3.84□□□□□ -1.79
TSR1YDL060W HMG2P12684 1045 aa3.84□□□□□ -1.79
TSR1YDL060W MGM1P32266 881 aa3.84□□□□□ -1.79
TSR1YDL060W YNL195CP40168 261 aa3.84□□□□□ -1.79
TSR1YDL060W RSM25P40496 264 aa3.84□□□□□ -1.79
TSR1YDL060W YJL055WP47044 245 aa3.84□□□□□ -1.79
TSR1YDL060W YGL242CP53066 181 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms