RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W MET18P40469 1032 aa3.42□□□□□ -1.86
DPB3YBR278W PKP1P40530 394 aa3.42□□□□□ -1.86
DPB3YBR278W AXL1P40851 1208 aa3.42□□□□□ -1.86
DPB3YBR278W GPD2P41911 440 aaKnown RBP3.42□□□□□ -1.86
DPB3YBR278W YFR020WP43600 232 aa3.42□□□□□ -1.86
DPB3YBR278W YJL043WP47053 257 aa3.42□□□□□ -1.86
DPB3YBR278W DIA3P52290 468 aa3.42□□□□□ -1.86
DPB3YBR278W YGR250CP53316 781 aaKnown RBP3.42□□□□□ -1.86
DPB3YBR278W IST1P53843 298 aaPredicted RBP3.42□□□□□ -1.86
DPB3YBR278W BUD22Q04347 519 aaKnown RBP3.42□□□□□ -1.86
DPB3YBR278W ATG9Q12142 997 aa3.42□□□□□ -1.86
DPB3YBR278W SNU66Q12420 587 aaPredicted RBP3.42□□□□□ -1.86
DPB3YBR278W YPT6Q99260 215 aa3.42□□□□□ -1.86
DPB3YBR278W DFR1P07807 211 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
DPB3YBR278W ADH7P25377 361 aa3.41□□□□□ -1.86
DPB3YBR278W GSY2P27472 705 aa3.41□□□□□ -1.86
DPB3YBR278W RPC34P32910 317 aa3.41□□□□□ -1.86
DPB3YBR278W YKL050CP35736 922 aa3.41□□□□□ -1.86
DPB3YBR278W UIP3P39547 235 aa3.41□□□□□ -1.86
DPB3YBR278W EXO1P39875 702 aa3.41□□□□□ -1.86
DPB3YBR278W AFG3P39925 761 aa3.41□□□□□ -1.86
DPB3YBR278W MET28P40573 187 aa3.41□□□□□ -1.86
DPB3YBR278W DPB11P47027 764 aaPredicted RBP3.41□□□□□ -1.86
DPB3YBR278W RSC1P53236 928 aa3.41□□□□□ -1.86
DPB3YBR278W JJJ1P53863 590 aa3.41□□□□□ -1.86
DPB3YBR278W YMR155WQ03795 547 aa3.41□□□□□ -1.86
DPB3YBR278W IRC10Q08118 586 aa3.41□□□□□ -1.86
DPB3YBR278W FMP40Q08968 688 aaPredicted RBP3.41□□□□□ -1.86
DPB3YBR278W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
DPB3YBR278W INP53Q12271 1107 aa3.41□□□□□ -1.86
DPB3YBR278W GRX6Q12438 231 aa3.41□□□□□ -1.86
DPB3YBR278W MF(ALPHA)1P01149 165 aa3.4□□□□□ -1.87
DPB3YBR278W PET111P08468 800 aa3.4□□□□□ -1.87
DPB3YBR278W AQY1P0CD91 305 aa3.4□□□□□ -1.87
DPB3YBR278W SPO11P23179 398 aa3.4□□□□□ -1.87
DPB3YBR278W VMA8P32610 256 aaKnown RBP3.4□□□□□ -1.87
DPB3YBR278W ORC2P32833 620 aa3.4□□□□□ -1.87
DPB3YBR278W UBP11P36026 717 aa3.4□□□□□ -1.87
DPB3YBR278W SNU114P36048 1008 aaKnown RBP3.4□□□□□ -1.87
DPB3YBR278W MUM2P38236 366 aa3.4□□□□□ -1.87
DPB3YBR278W FTH1P38310 465 aa3.4□□□□□ -1.87
DPB3YBR278W BUR6P40096 142 aa3.4□□□□□ -1.87
DPB3YBR278W SGN1P40561 250 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
DPB3YBR278W MAF1P41910 395 aa3.4□□□□□ -1.87
DPB3YBR278W SAE2P46946 345 aa3.4□□□□□ -1.87
DPB3YBR278W VID30P53076 958 aa3.4□□□□□ -1.87
DPB3YBR278W MAK10Q02197 733 aa3.4□□□□□ -1.87
DPB3YBR278W THI3Q07471 609 aa3.4□□□□□ -1.87
DPB3YBR278W LUC7Q07508 261 aaPredicted RBP3.4□□□□□ -1.87
DPB3YBR278W SGS1P35187 1447 aa3.39□□□□□ -1.87
DPB3YBR278W ADE5,7P07244 802 aaKnown RBP3.39□□□□□ -1.87
DPB3YBR278W HOM3P10869 527 aa3.39□□□□□ -1.87
DPB3YBR278W PDX1P16451 410 aa3.39□□□□□ -1.87
DPB3YBR278W GPI10P30777 616 aa3.39□□□□□ -1.87
DPB3YBR278W SMF1P38925 575 aa3.39□□□□□ -1.87
DPB3YBR278W ERV46P39727 415 aa3.39□□□□□ -1.87
DPB3YBR278W PAC2P39937 518 aa3.39□□□□□ -1.87
DPB3YBR278W YIL166CP40445 542 aa3.39□□□□□ -1.87
DPB3YBR278W DOT5P40553 215 aa3.39□□□□□ -1.87
DPB3YBR278W CDC1P40986 491 aa3.39□□□□□ -1.87
DPB3YBR278W ROK1P45818 564 aaPredicted RBP3.39□□□□□ -1.87
DPB3YBR278W YPR003CP53394 754 aa3.39□□□□□ -1.87
DPB3YBR278W ZDS2P54786 942 aa3.39□□□□□ -1.87
DPB3YBR278W APM1Q00776 475 aaPredicted RBP3.39□□□□□ -1.87
DPB3YBR278W RTT109Q07794 436 aa3.39□□□□□ -1.87
DPB3YBR278W RIM20Q12033 661 aa3.39□□□□□ -1.87
DPB3YBR278W SUT2Q12286 268 aa3.39□□□□□ -1.87
DPB3YBR278W RDL1Q12305 139 aaKnown RBP3.39□□□□□ -1.87
DPB3YBR278W BI2P03873 423 aa3.38□□□□□ -1.87
DPB3YBR278W EST1P17214 699 aaPredicted RBP3.38□□□□□ -1.87
DPB3YBR278W SEF1P34228 1148 aa3.38□□□□□ -1.87
DPB3YBR278W PXA2P34230 853 aa3.38□□□□□ -1.87
DPB3YBR278W BLI1P35727 113 aa3.38□□□□□ -1.87
DPB3YBR278W YPT53P36019 220 aa3.38□□□□□ -1.87
DPB3YBR278W SRP72P38688 640 aaKnown RBP3.38□□□□□ -1.87
DPB3YBR278W PET130P47065 347 aa3.38□□□□□ -1.87
DPB3YBR278W APT1P49435 187 aaKnown RBP3.38□□□□□ -1.87
DPB3YBR278W BOP3P53958 396 aa3.38□□□□□ -1.87
DPB3YBR278W EFM6P53970 246 aa3.38□□□□□ -1.87
DPB3YBR278W DPB4Q04603 196 aaKnown RBP3.38□□□□□ -1.87
DPB3YBR278W MRD1Q06106 887 aaKnown RBP3.38□□□□□ -1.87
DPB3YBR278W ARO10Q06408 635 aa3.38□□□□□ -1.87
DPB3YBR278W YOL159CQ08300 171 aa3.38□□□□□ -1.87
DPB3YBR278W YOR389WQ08912 624 aa3.38□□□□□ -1.87
DPB3YBR278W AVL9Q12500 764 aa3.38□□□□□ -1.87
DPB3YBR278W YOL159C-AQ3E769 90 aa3.38□□□□□ -1.87
DPB3YBR278W GPA1P08539 472 aa3.37□□□□□ -1.87
DPB3YBR278W MRP2P10663 115 aaPredicted RBP3.37□□□□□ -1.87
DPB3YBR278W MAK32P23060 363 aa3.37□□□□□ -1.87
DPB3YBR278W PUP3P25451 205 aaKnown RBP3.37□□□□□ -1.87
DPB3YBR278W ADY2P25613 283 aa3.37□□□□□ -1.87
DPB3YBR278W SYN8P31377 255 aa3.37□□□□□ -1.87
DPB3YBR278W SSE2P32590 693 aaKnown RBP3.37□□□□□ -1.87
DPB3YBR278W TCD2P36101 447 aaKnown RBP3.37□□□□□ -1.87
DPB3YBR278W CST26P38226 397 aa3.37□□□□□ -1.87
DPB3YBR278W VID24P38263 362 aa3.37□□□□□ -1.87
DPB3YBR278W ELO1P39540 310 aa3.37□□□□□ -1.87
DPB3YBR278W QRI1P43123 477 aaKnown RBP3.37□□□□□ -1.87
DPB3YBR278W FAR3P46671 204 aa3.37□□□□□ -1.87
DPB3YBR278W STU2P46675 888 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms