RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTA1	YAL043C	HEH2	Q03281	663 aa		4.08	□□□□□ -1.76
PTA1	YAL043C	SPO71	Q03868	1245 aa		4.08	□□□□□ -1.76
PTA1	YAL043C	TAF11	Q04226	346 aa		4.08	□□□□□ -1.76
PTA1	YAL043C	CDC123	Q05791	360 aa		4.08	□□□□□ -1.76
PTA1	YAL043C	SEC10	Q06245	871 aa		4.08	□□□□□ -1.76
PTA1	YAL043C	AAD4	Q07747	329 aa		4.08	□□□□□ -1.76
PTA1	YAL043C	YEH2	Q07950	538 aa		4.08	□□□□□ -1.76
PTA1	YAL043C	YOR342C	Q12182	319 aa		4.08	□□□□□ -1.76
PTA1	YAL043C	WHI5	Q12416	295 aa		4.08	□□□□□ -1.76
PTA1	YAL043C	COX5A	P00424	153 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	ARG3	P05150	338 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	HMG1	P12683	1054 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	ATR1	P13090	542 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	POX1	P13711	748 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	SEC63	P14906	663 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	TEC1	P18412	486 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	PKC1	P24583	1151 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	DPH2	P32461	534 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	KAR9	P32526	644 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	LHS1	P36016	881 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	GIP4	P39732	760 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	ECM10	P39987	644 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	SKP2	P42843	763 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	ROK1	P45818	564 aa	Predicted RBP	4.07	□□□□□ -1.76
PTA1	YAL043C	PXR1	P53335	271 aa	Predicted RBP	4.07	□□□□□ -1.76
PTA1	YAL043C	RMI1	Q02685	241 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	TRS31	Q03337	283 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	YMR010W	Q03687	405 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	YDR179W-A	Q03983	463 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	ECM38	Q05902	660 aa	Predicted RBP	4.07	□□□□□ -1.76
PTA1	YAL043C	ECM7	Q06200	448 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	ARR2	Q06597	130 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	NRT1	Q08485	598 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	RRP36	Q12481	300 aa	Predicted RBP	4.07	□□□□□ -1.76
PTA1	YAL043C	PUT2	P07275	575 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	SEC53	P07283	254 aa	Known RBP	4.07	□□□□□ -1.76
PTA1	YAL043C	AMD1	P15274	810 aa	Known RBP	4.07	□□□□□ -1.76
PTA1	YAL043C	MSB1	P21339	1137 aa	Known RBP	4.07	□□□□□ -1.76
PTA1	YAL043C	CNA1	P23287	553 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	RAD16	P31244	790 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	NTG1	P31378	399 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	SET3	P36124	751 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	RDH54	P38086	958 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	YER186C	P40101	306 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	RBL2	P48606	106 aa	Known RBP	4.07	□□□□□ -1.76
PTA1	YAL043C	SHE4	P51534	789 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	HST3	P53687	447 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	YNR063W	P53749	607 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	MMT1	Q03218	510 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	MSC2	Q03455	724 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	SMP3	Q04174	516 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	YMR226C	Q05016	267 aa	Known RBP	4.07	□□□□□ -1.76
PTA1	YAL043C	PMT7	Q06644	662 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	SWC7	Q06707	132 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	MET32	Q12041	191 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	MDY2	Q12285	212 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	AFI1	Q99222	893 aa		4.07	□□□□□ -1.76
PTA1	YAL043C	RIF1	P29539	1916 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	PRC1	P00729	532 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	ATP2	P00830	511 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	RHO1	P06780	209 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	GLN3	P18494	730 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	VPS3	P23643	1011 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	YIH1	P25637	258 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	YCR099C	P25657	155 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	PTM1	P32857	523 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	ASH1	P34233	588 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	CTP1	P38152	299 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	YBR053C	P38235	358 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	SIF2	P38262	535 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	RSC30	P38781	883 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	YHR182W	P38870	785 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	CAB2	P40506	365 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	IAH1	P41734	238 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	GCN20	P43535	752 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	OCA1	P50946	238 aa	Predicted RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	YGR053C	P53234	283 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	TRM112	P53738	135 aa	Predicted RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	YMR099C	Q03161	297 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	HMO1	Q03973	246 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	KRE28	Q04431	385 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	MRX10	Q05648	414 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	SNX3	Q08826	162 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	YOR022C	Q12204	715 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	HIS1	P00498	297 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	SUC2	P00724	532 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	GUK1	P15454	187 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	ATP12	P22135	325 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	RVS161	P25343	265 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	ITR2	P30606	609 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	EFM1	P38732	585 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	SSZ1	P38788	538 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	LAS21	P40367	830 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	ELP2	P42935	788 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
PTA1	YAL043C	RAD17	P48581	401 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	VMA10	P48836	114 aa	Known RBP	4.06	□□□□□ -1.76
PTA1	YAL043C	GET1	P53192	235 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	SPC98	P53540	846 aa		4.06	□□□□□ -1.76
PTA1	YAL043C	YCS4	Q06156	1176 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms