RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 FAM43AQ8N2R8 423 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 NFU1Q9UMS0 254 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ORC6Q9Y5N6 252 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 MYO3BQ8WXR4 1341 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 NCKAP5LQ9HCH0 1330 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 KDM3AQ9Y4C1 1321 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 A0A1B0GVL5 298 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 CNNM4Q6P4Q7 775 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 NME8Q8N427 588 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ZSCAN18Q8TBC5 510 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 PGBD1Q96JS3 809 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 LSM7Q9UK45 103 aaKnown RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 CAND2O75155 1236 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 GUCA1AP43080 201 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 CUL1Q13616 776 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 SH3KBP1Q96B97 665 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ATF5Q9Y2D1 282 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 PCDHA1Q9Y5I3 950 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 CARNS1A5YM72 827 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 TRIM75PA6NK02 468 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 NVLO15381 856 aaKnown RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 TRIM37O94972 964 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 F13A1P00488 732 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 RC3H1Q5TC82 1133 aaKnown RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 PRPF40BQ6NWY9 871 aaKnown RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 GPATCH11Q8N954 259 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 BAG1Q99933 345 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 AMNQ9BXJ7 453 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 SUGCTQ9HAC7 445 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 FOSP01100 380 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 TNFAIP3P21580 790 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 PIK3R5Q8WYR1 880 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 SCUBE2Q9NQ36 999 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 SUCLA2Q9P2R7 463 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 EHBP1L1Q8N3D4 1523 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 PRR29P0C7W0 189 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 MAN1A1P33908 653 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 IGBP1P78318 339 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 UAP1Q16222 522 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 DHX36Q9H2U1 1008 aaKnown RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 GARSP41250 739 aaKnown RBP6.91□□□□□ -1.3
CDKL5-205ENST00000623535 ADCY7P51828 1080 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 PPP1R2P3Q6NXS1 205 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 C16orf62Q7Z3J2 963 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 MAP7D3Q8IWC1 876 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 CCHCR1Q8TD31 782 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 CCDC138Q96M89 665 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 KIF2CQ99661 725 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 SLAIN2Q9P270 581 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 FBXO40Q9UH90 709 aa6.91□□□□□ -1.3
CDKL5-205ENST00000623535 TNPO2O14787 897 aaKnown RBP6.9□□□□□ -1.3
CDKL5-205ENST00000623535 PHEXP78562 749 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 USH1GQ495M9 461 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 GDAP1L1Q96MZ0 367 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 NR1H4Q96RI1 486 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-205ENST00000623535 VPS37BQ9H9H4 285 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 UTP6Q9NYH9 597 aaKnown RBP6.9□□□□□ -1.3
CDKL5-205ENST00000623535 MSRAQ9UJ68 235 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 CC2D2AQ9P2K1 1620 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 NEMFO60524 1076 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 SH3TC2Q8TF17 1288 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 SLC7A3Q8WY07 619 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 PHKBQ93100 1093 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 PLCB1Q9NQ66 1216 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 BLMP54132 1417 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-205ENST00000623535 PDE8AO60658 829 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 MRE11P49959 708 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 BBOF1Q8ND07 529 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 C1orf115Q9H7X2 142 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 NSD2O96028 1365 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 CEP120Q8N960 986 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 UCMAQ8WVF2 138 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 SFMBT1Q9UHJ3 866 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 IKBKBO14920 756 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 TRAPPC3O43617 180 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 JADE1Q6IE81 842 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 BRINP3Q76B58 766 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 NT5C3AQ9H0P0 336 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 CCDC8Q9H0W5 538 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-205ENST00000623535 NKIRAS1Q9NYS0 192 aa6.9□□□□□ -1.3
CDKL5-205ENST00000623535 SAP30BPQ9UHR5 308 aaKnown RBP6.9□□□□□ -1.3
CDKL5-205ENST00000623535 RBM6P78332 1123 aaKnown RBP6.9□□□□□ -1.3
CDKL5-205ENST00000623535 DDX39AO00148 427 aaKnown RBP6.9□□□□□ -1.31
CDKL5-205ENST00000623535 LMBRD2Q68DH5 695 aaPredicted RBP6.9□□□□□ -1.31
CDKL5-205ENST00000623535 CROCCP2Q86T23 111 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 WDR48Q8TAF3 677 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 STMN2Q93045 179 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 MFSD14BQ5SR56 506 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 ACTN4O43707 911 aaKnown RBP6.9□□□□□ -1.31
CDKL5-205ENST00000623535 ZNF853P0CG23 659 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 CCND2P30279 289 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 TUBB4BP68371 445 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 CCDC122Q5T0U0 273 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 ABHD8Q96I13 439 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 ZFP42Q96MM3 310 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 PPEF1O14829 653 aaPredicted RBP6.9□□□□□ -1.31
CDKL5-205ENST00000623535 SUN1O94901 812 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 HSPA4P34932 840 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 SURF1Q15526 300 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms