RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 NFE2L2Q16236 605 aa8.84□□□□□ -0.99
SCAMP1-206ENST00000618166 MFSD14CQ5VZR4 134 aa8.84□□□□□ -0.99
SCAMP1-206ENST00000618166 SLC44A5Q8NCS7 719 aa8.84□□□□□ -0.99
SCAMP1-206ENST00000618166 ARRDC4Q8NCT1 418 aa8.84□□□□□ -0.99
SCAMP1-206ENST00000618166 ALG13Q9NP73 1137 aaKnown RBP8.84□□□□□ -0.99
SCAMP1-206ENST00000618166 PRDM9Q9NQV7 894 aa8.84□□□□□ -0.99
SCAMP1-206ENST00000618166 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
SCAMP1-206ENST00000618166 PLIN1O60240 522 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 MSCO60682 206 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 IGKV5-2P06315 115 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 CYBAP13498 195 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 POU3F3P20264 500 aaPredicted RBP8.83□□□□□ -1
SCAMP1-206ENST00000618166 LRRC41Q15345 812 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 HPS1Q92902 700 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 MRGPRX2Q96LB1 330 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 CFAP53Q96M91 514 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 MFSD14AQ96MC6 490 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 PLEKHF1Q96S99 279 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 SLC27A5Q9Y2P5 690 aa8.83□□□□□ -1
SCAMP1-206ENST00000618166 MYBBP1AQ9BQG0 1328 aaKnown RBP8.82□□□□□ -1
SCAMP1-206ENST00000618166 ATRXP46100 2492 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 NCOR2Q9Y618 2525 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 LOC285556D6RIA3 1793 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 ARHGEF15O94989 841 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 TIMP1P01033 207 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 HDLBPQ00341 1268 aaKnown RBP8.82□□□□□ -1
SCAMP1-206ENST00000618166 SPP2Q13103 211 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 MAP2K5Q13163 448 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 FAM47AQ5JRC9 791 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 MFSD5Q6N075 450 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 SPRED2Q7Z698 418 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 PLEKHH3Q7Z736 793 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 NPAS3Q8IXF0 933 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 PROCA1Q8NCQ7 364 aaPredicted RBP8.82□□□□□ -1
SCAMP1-206ENST00000618166 GPRC5AQ8NFJ5 357 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.82□□□□□ -1
SCAMP1-206ENST00000618166 NPLOC4Q8TAT6 608 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 HYPKQ9NX55 129 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 RBPJLQ9UBG7 517 aa8.82□□□□□ -1
SCAMP1-206ENST00000618166 MAPK4P31152 587 aa8.81□□□□□ -1
SCAMP1-206ENST00000618166 FUT2Q10981 343 aa8.81□□□□□ -1
SCAMP1-206ENST00000618166 PPIGQ13427 754 aaKnown RBP eCLIP8.81□□□□□ -1
SCAMP1-206ENST00000618166 MSS51Q4VC12 460 aa8.81□□□□□ -1
SCAMP1-206ENST00000618166 CDC42EP5Q6NZY7 148 aa8.81□□□□□ -1
SCAMP1-206ENST00000618166 BRICD5Q6PL45 260 aa8.81□□□□□ -1
SCAMP1-206ENST00000618166 SH3BP5LQ7L8J4 393 aa8.81□□□□□ -1
SCAMP1-206ENST00000618166 EDC3Q96F86 508 aaKnown RBP8.81□□□□□ -1
SCAMP1-206ENST00000618166 FAM84BQ96KN1 310 aaPredicted RBP8.81□□□□□ -1
SCAMP1-206ENST00000618166 METTL22Q9BUU2 404 aaPredicted RBP8.81□□□□□ -1
SCAMP1-206ENST00000618166 TBX21Q9UL17 535 aa8.81□□□□□ -1
SCAMP1-206ENST00000618166 WDR87Q6ZQQ6 2873 aa8.81□□□□□ -1
SCAMP1-206ENST00000618166 MYH3P11055 1940 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 APBB1O00213 710 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 IGHA2P01877 340 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 HIBADHP31937 336 aaKnown RBP8.8□□□□□ -1
SCAMP1-206ENST00000618166 HERVK_113P62684 666 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 ATP2B2Q01814 1243 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 CWF19L2Q2TBE0 894 aaKnown RBP8.8□□□□□ -1
SCAMP1-206ENST00000618166 PRAMEF19Q5SWL8 479 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 OTOP2Q7RTS6 562 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 UBE3BQ7Z3V4 1068 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 IRF7Q92985 503 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 PAGR1Q9BTK6 254 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 PHF24Q9UPV7 400 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 LRRFIP2Q9Y608 721 aaKnown RBP8.8□□□□□ -1
SCAMP1-206ENST00000618166 GAKO14976 1311 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 ZNF521Q96K83 1311 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 PLXNA3P51805 1871 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 DOCK1Q14185 1865 aa8.8□□□□□ -1
SCAMP1-206ENST00000618166 A0A1W2PQ45 241 aaPredicted RBP8.79□□□□□ -1
SCAMP1-206ENST00000618166 A0A1W2PQY0 241 aa8.79□□□□□ -1
SCAMP1-206ENST00000618166 FAM196BA6NMK8 535 aa8.79□□□□□ -1
SCAMP1-206ENST00000618166 CA3P07451 260 aa8.79□□□□□ -1
SCAMP1-206ENST00000618166 KCNA5P22460 613 aa8.79□□□□□ -1
SCAMP1-206ENST00000618166 ERVK-9P63128 1117 aa8.79□□□□□ -1
SCAMP1-206ENST00000618166 ERVK-24P63145 666 aa8.79□□□□□ -1
SCAMP1-206ENST00000618166 IRX3P78415 501 aaPredicted RBP8.79□□□□□ -1
SCAMP1-206ENST00000618166 PSRC1Q6PGN9 363 aaPredicted RBP8.79□□□□□ -1
SCAMP1-206ENST00000618166 ARNTL2Q8WYA1 636 aa8.79□□□□□ -1
SCAMP1-206ENST00000618166 ATOH1Q92858 354 aaPredicted RBP8.79□□□□□ -1
SCAMP1-206ENST00000618166 PPP1R12CQ9BZL4 782 aa8.79□□□□□ -1
SCAMP1-206ENST00000618166 UBE2ZQ9H832 354 aaPredicted RBP8.79□□□□□ -1
SCAMP1-206ENST00000618166 PTPRZ1P23471 2315 aaPredicted RBP8.79□□□□□ -1
SCAMP1-206ENST00000618166 SETXQ7Z333 2677 aaKnown RBP8.78□□□□□ -1
SCAMP1-206ENST00000618166 LPXNO60711 386 aa8.78□□□□□ -1
SCAMP1-206ENST00000618166 CTNND1O60716 968 aaKnown RBP8.78□□□□□ -1
SCAMP1-206ENST00000618166 SLC5A1P13866 664 aa8.78□□□□□ -1
SCAMP1-206ENST00000618166 PABPC4Q13310 644 aaKnown RBP eCLIP8.78□□□□□ -1
SCAMP1-206ENST00000618166 GRB10Q13322 594 aa8.78□□□□□ -1
SCAMP1-206ENST00000618166 DIXDC1Q155Q3 683 aa8.78□□□□□ -1
SCAMP1-206ENST00000618166 LEXMQ3ZCV2 418 aa8.78□□□□□ -1
SCAMP1-206ENST00000618166 PTCRAQ6ISU1 281 aaPredicted RBP8.78□□□□□ -1
SCAMP1-206ENST00000618166 ANKRD33Q7Z3H0 272 aa8.78□□□□□ -1
SCAMP1-206ENST00000618166 METTL3Q86U44 580 aaKnown RBP8.78□□□□□ -1
SCAMP1-206ENST00000618166 CCAR1Q8IX12 1150 aaKnown RBP8.78□□□□□ -1
SCAMP1-206ENST00000618166 ZNF594Q96JF6 807 aaPredicted RBP8.78□□□□□ -1
SCAMP1-206ENST00000618166 REPIN1Q9BWE0 567 aaKnown RBP8.78□□□□□ -1
SCAMP1-206ENST00000618166 MAP3K2Q9Y2U5 619 aa8.78□□□□□ -1
SCAMP1-206ENST00000618166 PCDHA11Q9Y5I1 949 aa8.78□□□□□ -1
SCAMP1-206ENST00000618166 PRR23AA6NEV1 266 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms