RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 CSADQ9Y600 493 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 XIRP1Q702N8 1843 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 ZC3H13Q5T200 1668 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 DHX29Q7Z478 1369 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 DEPDC5O75140 1603 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 RTEL1-TNFRSF6BF6WH68 1400 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 ALG1L2C9J202 215 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 AGRPO00253 132 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 PMS1P54277 932 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 SV2CQ496J9 727 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 YOD1Q5VVQ6 348 aaPredicted RBP8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 FAM117BQ6P1L5 589 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 C20orf204Q6ZNR8 217 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 PPFIBP1Q86W92 1011 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 MCATQ8IVS2 390 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 TMEM192Q8IY95 271 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 SLFN12Q8IYM2 578 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 KLHDC7BQ96G42 594 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 TRIM47Q96LD4 638 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 GABBR1Q9UBS5 961 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 HIF3AQ9Y2N7 669 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 EHBP1L1Q8N3D4 1523 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 TNRQ92752 1358 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 WASHC2CQ9Y4E1 1318 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 NEURL1BA8MQ27 555 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 BBS9Q3SYG4 887 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 CT47A1Q5JQC4 288 aaPredicted RBP8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 AFAP1L2Q8N4X5 818 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 DHRS1Q96LJ7 313 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 CDC6Q99741 560 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 TJP2Q9UDY2 1190 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 MCM8Q9UJA3 840 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 MTUS2Q5JR59 1369 aa8.23□□□□□ -1.09
TGFBR1-208ENST00000550253 MED14O60244 1454 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 CAMSAP2Q08AD1 1489 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 UGGT1Q9NYU2 1555 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 MROH1Q8NDA8 1641 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 RNF17Q9BXT8 1623 aaKnown RBP8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 TRBV23-1A0A0A0MS06 115 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 TRAV20A0A0B4J274 112 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 ANKRD34BA5PLL1 514 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 GFRA3O60609 400 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 CAPNS1P04632 268 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 TBX4P57082 545 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 HNRNPUQ00839 825 aaKnown RBP eCLIP8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 GAS6Q14393 721 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 SCUBE1Q8IWY4 988 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 FAM13CQ8NE31 585 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 WDR18Q9BV38 432 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 TARS2Q9BW92 718 aaKnown RBP8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 CARD10Q9BWT7 1032 aa8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 MRPL4Q9BYD3 311 aaKnown RBP8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 JPH1Q9HDC5 661 aaPredicted RBP8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 SUCOQ9UBS9 1254 aaKnown RBP8.22□□□□□ -1.09
TGFBR1-208ENST00000550253 CEP162Q5TB80 1403 aa8.21□□□□□ -1.09
TGFBR1-208ENST00000550253 CEP152O94986 1710 aa8.21□□□□□ -1.09
TGFBR1-208ENST00000550253 UBR1Q8IWV7 1749 aa8.21□□□□□ -1.09
TGFBR1-208ENST00000550253 DNAJC25-GNG10A0A024R161 153 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 LOC102724159A0A0B4J2E5 919 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 RGS13O14921 159 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 KIF3BO15066 747 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 EIF5BO60841 1220 aaKnown RBP8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 SDSP20132 328 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 AFF1P51825 1210 aaKnown RBP8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 ETF1P62495 437 aaKnown RBP8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 HSP90AA2PQ14568 343 aaPredicted RBP8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 PWP2Q15269 919 aaKnown RBP8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 LRRTM3Q86VH5 581 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 C8orf48Q96LL4 319 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 SLC6A18Q96N87 628 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 APBA2Q99767 749 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 INTS7Q9NVH2 962 aaKnown RBP8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 GEMIN8Q9NWZ8 242 aaKnown RBP8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 CCDC141Q6ZP82 1450 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 LRRC7Q96NW7 1537 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 FAM135AQ9P2D6 1515 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 NPHP4O75161 1426 aaPredicted RBP8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 MIA2Q96PC5 1412 aa8.21□□□□□ -1.1
TGFBR1-208ENST00000550253 NCOA2Q15596 1464 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 TPD52L2O43399 206 aaKnown RBP8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 AOC2O75106 756 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 UBOX5O94941 541 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 DLGAP3O95886 979 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 ALAS2P22557 587 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 YARSP54577 528 aaKnown RBP8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 ERVK-24P63145 666 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 PPP2R2AP63151 447 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 FAM50AQ14320 339 aaKnown RBP8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 PPM1JQ5JR12 505 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 ZBTB37Q5TC79 503 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 ZNF513Q8N8E2 541 aaPredicted RBP8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 TMEM87BQ96K49 555 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 AARSD1Q9BTE6 412 aaKnown RBP8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 TCEAL9Q9UHQ7 104 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 GGA1Q9UJY5 639 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 SYNGAP1Q96PV0 1343 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 SYNMO15061 1565 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 ARHGEF5Q12774 1597 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 CFAP65Q6ZU64 1925 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms