RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NAPBQ9H115 298 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 TRMT112Q9UI30 125 aaKnown RBP8.55□□□□□ -1.04
NEDD9-208ENST00000504387 LUC7L2Q9Y383 392 aaKnown RBP8.55□□□□□ -1.04
NEDD9-208ENST00000504387 JCADQ9P266 1359 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 DIP2AQ14689 1571 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 RGPD8O14715 1765 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-208ENST00000504387 ZNF532Q9HCE3 1301 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 SH2B2O14492 632 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 MOCS3O95396 460 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 TTF1Q15361 905 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 RTN1Q16799 776 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 TICAM2Q86XR7 235 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 APPBP2Q92624 585 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 UIMC1Q96RL1 719 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 LRWD1Q9UFC0 647 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 V9GY48 417 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 PP2D1A8MPX8 630 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 PPP1R12BO60237 982 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 CCDC172P0C7W6 258 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 HERVK_113P62684 666 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 AMPD2Q01433 879 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 ARID5AQ03989 594 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 CCNI2Q6ZMN8 369 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 MAATS1Q7Z4T9 603 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 DNAAF5Q86Y56 855 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 ZCRB1Q8TBF4 217 aaKnown RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 N4BP2L2Q92802 583 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 HPS3Q969F9 1004 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 TBC1D31Q96DN5 1066 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 PACSIN2Q9UNF0 486 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 JAG2Q9Y219 1238 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 ADAMTSL3P82987 1691 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 MYH8P13535 1937 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 PPP1R3GB7ZBB8 358 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 E7EVH7 732 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 MMP1P03956 469 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 PDHBP11177 359 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 MCAMP43121 646 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 PMS1P54277 932 aaKnown RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 TYW1BQ6NUM6 668 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 DNAJC10Q8IXB1 793 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 OR2W6PQ8NHA6 318 aa8.54□□□□□ -1.04
NEDD9-208ENST00000504387 CCDC43Q96MW1 224 aaKnown RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 PIH1D3Q9NQM4 214 aaKnown RBP8.54□□□□□ -1.04
NEDD9-208ENST00000504387 TRIM75PA6NK02 468 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 MYO1BO43795 1136 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 NEBLO76041 1014 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 SARSP49591 514 aaKnown RBP8.53□□□□□ -1.04
NEDD9-208ENST00000504387 PSEN1P49768 467 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 NNTQ13423 1086 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 TCIRG1Q13488 830 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 NTRK3Q16288 839 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 CTCFLQ8NI51 663 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-208ENST00000504387 TRIM47Q96LD4 638 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.53□□□□□ -1.04
NEDD9-208ENST00000504387 LY9Q9HBG7 655 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 NFU1Q9UMS0 254 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 CEP83Q9Y592 693 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 MON2Q7Z3U7 1717 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 UTYO14607 1347 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 CYP2D7A0A087X1C5 515 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 EIF3HO15372 352 aaKnown RBP eCLIP8.53□□□□□ -1.04
NEDD9-208ENST00000504387 MBD4O95243 580 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 FAM153BP0C7A2 387 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 HSPA2P54652 639 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 PTGDRQ13258 359 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 FAM153CQ494X1 144 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 TTMPQ5BVD1 217 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 TRAPPC11Q7Z392 1133 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 OR8K1Q8NGG5 319 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 RASGRP4Q8TDF6 673 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 RNPC3Q96LT9 517 aaKnown RBP8.53□□□□□ -1.04
NEDD9-208ENST00000504387 FAM207AQ9NSI2 230 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-208ENST00000504387 TMOD3Q9NYL9 352 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 FAM153AQ9UHL3 310 aa8.53□□□□□ -1.04
NEDD9-208ENST00000504387 ADAMTS3O15072 1205 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 HSF2BPO75031 334 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 VEGFAP15692 232 aaPredicted RBP8.52□□□□□ -1.04
NEDD9-208ENST00000504387 PRCPP42785 496 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 HDLBPQ00341 1268 aaKnown RBP8.52□□□□□ -1.04
NEDD9-208ENST00000504387 PPFIA1Q13136 1202 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 SF3B2Q13435 895 aaKnown RBP8.52□□□□□ -1.04
NEDD9-208ENST00000504387 ODF2Q5BJF6 829 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 BICDL1Q6ZP65 573 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 PIK3AP1Q6ZUJ8 805 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 MAGEB6Q8N7X4 407 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 IGDCC4Q8TDY8 1250 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.04
NEDD9-208ENST00000504387 LRP2BPQ9P2M1 347 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 TACC3Q9Y6A5 838 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 CAPN6Q9Y6Q1 641 aa8.52□□□□□ -1.04
NEDD9-208ENST00000504387 RPS6KA5O75582 802 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 PARP1P09874 1014 aaKnown RBP8.52□□□□□ -1.05
NEDD9-208ENST00000504387 ITGA6P23229 1130 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 PAX7P23759 505 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 PHKA1P46020 1223 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 PAK1Q13153 545 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 HLTFQ14527 1009 aaKnown RBP eCLIP8.52□□□□□ -1.052e-7■□□□□ 10.4
NEDD9-208ENST00000504387 WTAPQ15007 396 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms