RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 AS3MTQ9HBK9 375 aa22.63■■□□□ 1.21
USP11-205ENST00000467378 ORC4O43929 436 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 SPP2Q13103 211 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 RAB3GAP1Q15042 981 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 AKNAD1Q5T1N1 836 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 ZNF697Q5TEC3 545 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 TBC1D10CQ8IV04 446 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 ZNF280CQ8ND82 737 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 STAG1Q8WVM7 1258 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.62■■□□□ 1.21
USP11-205ENST00000467378 ANO2Q9NQ90 1003 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 PRDM6Q9NQX0 595 aa22.62■■□□□ 1.21
USP11-205ENST00000467378 MYH4Q9Y623 1939 aa22.61■■□□□ 1.21
USP11-205ENST00000467378 COL6A1P12109 1028 aa22.61■■□□□ 1.21
USP11-205ENST00000467378 HMGCS2P54868 508 aa22.61■■□□□ 1.21
USP11-205ENST00000467378 MAP3K21Q5TCX8 1036 aa22.61■■□□□ 1.21
USP11-205ENST00000467378 LBHD1Q9BQE6 289 aaPredicted RBP22.61■■□□□ 1.21
USP11-205ENST00000467378 ASCC2Q9H1I8 757 aaPredicted RBP22.61■■□□□ 1.21
USP11-205ENST00000467378 RBM8AQ9Y5S9 174 aaKnown RBP22.61■■□□□ 1.21
USP11-205ENST00000467378 CYP21A2P08686 494 aa22.6■■□□□ 1.21
USP11-205ENST00000467378 PCP11498 1178 aaKnown RBP22.6■■□□□ 1.21
USP11-205ENST00000467378 MFSD6Q6ZSS7 791 aa22.6■■□□□ 1.21
USP11-205ENST00000467378 SIAH1Q8IUQ4 282 aa22.6■■□□□ 1.21
USP11-205ENST00000467378 IGKV6D-41A0A0C4DH26 115 aa22.59■■□□□ 1.21
USP11-205ENST00000467378 TFAP4Q01664 338 aa22.59■■□□□ 1.21
USP11-205ENST00000467378 FAM47AQ5JRC9 791 aa22.59■■□□□ 1.21
USP11-205ENST00000467378 NEDD1Q8NHV4 660 aa22.59■■□□□ 1.21
USP11-205ENST00000467378 NUDT12Q9BQG2 462 aa22.59■■□□□ 1.21
USP11-205ENST00000467378 RNF41Q9H4P4 317 aaPredicted RBP22.59■■□□□ 1.21
USP11-205ENST00000467378 ZKSCAN1P17029 563 aaPredicted RBP22.58■■□□□ 1.21
USP11-205ENST00000467378 CACNB2Q08289 660 aaPredicted RBP22.58■■□□□ 1.21
USP11-205ENST00000467378 NECTIN1Q15223 517 aa22.58■■□□□ 1.21
USP11-205ENST00000467378 SH3D19Q5HYK7 790 aa22.58■■□□□ 1.21
USP11-205ENST00000467378 MORF4L1Q9UBU8 362 aa22.58■■□□□ 1.21
USP11-205ENST00000467378 PLIN4Q96Q06 1357 aa22.58■■□□□ 1.21
USP11-205ENST00000467378 A0A1W2PRG0 241 aa22.57■■□□□ 1.2
USP11-205ENST00000467378 USP17L10C9JJH3 530 aa22.57■■□□□ 1.2
USP11-205ENST00000467378 RANBP6O60518 1105 aaKnown RBP22.57■■□□□ 1.2
USP11-205ENST00000467378 TSPY3P0CV98 308 aa22.57■■□□□ 1.2
USP11-205ENST00000467378 TSPY8P0CW00 308 aa22.57■■□□□ 1.2
USP11-205ENST00000467378 BACE1P56817 501 aa22.57■■□□□ 1.2
USP11-205ENST00000467378 CLEC10AQ8IUN9 316 aa22.57■■□□□ 1.2
USP11-205ENST00000467378 TRMT44Q8IYL2 757 aaKnown RBP22.57■■□□□ 1.2
USP11-205ENST00000467378 MAFAQ8NHW3 353 aaPredicted RBP22.57■■□□□ 1.2
USP11-205ENST00000467378 ACER1Q8TDN7 264 aa22.57■■□□□ 1.2
USP11-205ENST00000467378 CDX2Q99626 313 aaPredicted RBP22.57■■□□□ 1.2
USP11-205ENST00000467378 KANSL2Q9H9L4 492 aa22.57■■□□□ 1.2
USP11-205ENST00000467378 NEDD4P46934 1319 aa22.57■■□□□ 1.2
USP11-205ENST00000467378 C19orf81C9J6K1 198 aa22.56■■□□□ 1.2
USP11-205ENST00000467378 XRCC5P13010 732 aaKnown RBP22.56■■□□□ 1.2
USP11-205ENST00000467378 CCND3P30281 292 aaPredicted RBP22.56■■□□□ 1.2
USP11-205ENST00000467378 IRX3P78415 501 aaPredicted RBP22.56■■□□□ 1.2
USP11-205ENST00000467378 RRP12Q5JTH9 1297 aaKnown RBP22.56■■□□□ 1.2
USP11-205ENST00000467378 SOCS4Q8WXH5 440 aa22.56■■□□□ 1.2
USP11-205ENST00000467378 TOMM22Q9NS69 142 aa22.56■■□□□ 1.2
USP11-205ENST00000467378 TAF6LQ9Y6J9 622 aa22.56■■□□□ 1.2
USP11-205ENST00000467378 LTBP2Q14767 1821 aa22.56■■□□□ 1.2
USP11-205ENST00000467378 TSPY2A6NKD2 308 aa22.55■■□□□ 1.2
USP11-205ENST00000467378 EEF2P13639 858 aaKnown RBP22.55■■□□□ 1.2
USP11-205ENST00000467378 ICA1Q05084 483 aa22.55■■□□□ 1.2
USP11-205ENST00000467378 MTMR2Q13614 643 aa22.55■■□□□ 1.2
USP11-205ENST00000467378 LHX8Q68G74 356 aa22.55■■□□□ 1.2
USP11-205ENST00000467378 SLC27A2O14975 620 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 PEX10O60683 326 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 NT5C2P49902 561 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 CREB3L3Q68CJ9 461 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 CCAR1Q8IX12 1150 aaKnown RBP22.54■■□□□ 1.2
USP11-205ENST00000467378 CEP95Q96GE4 821 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 SENP6Q9GZR1 1112 aaPredicted RBP22.54■■□□□ 1.2
USP11-205ENST00000467378 KIAA1683Q9H0B3 1180 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 IL17RBQ9NRM6 502 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 EMILIN3Q9NT22 766 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 MTMR4Q9NYA4 1195 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 NYAP2Q9P242 653 aa22.54■■□□□ 1.2
USP11-205ENST00000467378 E7EWF7 191 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 REC8O95072 547 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 USP17L2Q6R6M4 530 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 STOX1Q6ZVD7 989 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 GPRC5AQ8NFJ5 357 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 ESR2Q92731 530 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 CNNM2Q9H8M5 875 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 ARHGEF10LQ9HCE6 1279 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 TCP11L1Q9NUJ3 509 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 PRKAG2Q9UGJ0 569 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 TMX2Q9Y320 296 aa22.53■■□□□ 1.2
USP11-205ENST00000467378 B4E1Z4 1266 aa22.52■■□□□ 1.2
USP11-205ENST00000467378 NOVP48745 357 aa22.52■■□□□ 1.2
USP11-205ENST00000467378 USP14P54578 494 aa22.52■■□□□ 1.2
USP11-205ENST00000467378 CCL14Q16627 93 aa22.52■■□□□ 1.2
USP11-205ENST00000467378 MKL1Q969V6 931 aa22.52■■□□□ 1.2
USP11-205ENST00000467378 C12orf42Q96LP6 360 aa22.52■■□□□ 1.2
USP11-205ENST00000467378 P2RX7Q99572 595 aaKnown RBP22.52■■□□□ 1.2
USP11-205ENST00000467378 KRT23Q9C075 422 aa22.52■■□□□ 1.2
USP11-205ENST00000467378 SEMA6BQ9H3T3 888 aa22.52■■□□□ 1.2
USP11-205ENST00000467378 ZSWIM5Q9P217 1185 aa22.52■■□□□ 1.2
USP11-205ENST00000467378 EPB41L2O43491 1005 aaKnown RBP22.51■■□□□ 1.19
USP11-205ENST00000467378 NMT2O60551 498 aa22.51■■□□□ 1.19
USP11-205ENST00000467378 KDM4AO75164 1064 aa22.51■■□□□ 1.19
USP11-205ENST00000467378 RGS2P41220 211 aa22.51■■□□□ 1.19
USP11-205ENST00000467378 ATN1P54259 1190 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms