RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 CCDC181Q5TID7 509 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 KRT26Q7Z3Y9 468 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 DZIP3Q86Y13 1208 aaKnown RBP10.31□□□□□ -0.76
HPS4-203ENST00000402105 CCDC24Q8N4L8 307 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 RUFY1Q96T51 708 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 RNF41Q9H4P4 317 aaPredicted RBP10.31□□□□□ -0.76
HPS4-203ENST00000402105 PCDH11XQ9BZA7 1347 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 PCDH11YQ9BZA8 1340 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 MAGEB6P1A0A0J9YX57 407 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 PARP1P09874 1014 aaKnown RBP10.31□□□□□ -0.76
HPS4-203ENST00000402105 IL2RBP14784 551 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 UBA7P41226 1012 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
HPS4-203ENST00000402105 WHAMMP3Q1A5X7 153 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 TCP11X2Q5H9J9 407 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 KCTD16Q68DU8 428 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 OR8K1Q8NGG5 319 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 HPS3Q969F9 1004 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 VAT1LQ9HCJ6 419 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 AGPAT5Q9NUQ2 364 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 RPN1P04843 607 aaKnown RBP10.3□□□□□ -0.76
HPS4-203ENST00000402105 TBC1D8BQ0IIM8 1120 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 GSDMAQ96QA5 445 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 EHD2Q9NZN4 543 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 CHD2O14647 1828 aaKnown RBP10.3□□□□□ -0.76
HPS4-203ENST00000402105 USP17L12C9JPN9 530 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 USP17L21D6R901 530 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 ADAMTS3O15072 1205 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 ATP1A2P50993 1020 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 SF3A3Q12874 501 aaKnown RBP eCLIP10.3□□□□□ -0.769e-7■■■■□ 22
HPS4-203ENST00000402105 CCDC70Q6NSX1 233 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 LRRC31Q6UY01 552 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 GIGYF2Q6Y7W6 1299 aaKnown RBP10.3□□□□□ -0.76
HPS4-203ENST00000402105 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 ENAHQ8N8S7 591 aaPredicted RBP10.3□□□□□ -0.76
HPS4-203ENST00000402105 FAM207AQ9NSI2 230 aaPredicted RBP10.3□□□□□ -0.76
HPS4-203ENST00000402105 TSPY2A6NKD2 308 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 IGHMBP2P38935 993 aaKnown RBP10.3□□□□□ -0.76
HPS4-203ENST00000402105 ARID5AQ03989 594 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 MUM1L1Q5H9M0 696 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 ADGRA1Q86SQ6 560 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 FAM71BQ8TC56 605 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 PIGBQ92521 554 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 ZSCAN10Q96SZ4 725 aaPredicted RBP10.3□□□□□ -0.76
HPS4-203ENST00000402105 MMRN2Q9H8L6 949 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 AATFQ9NY61 560 aaKnown RBP eCLIP10.3□□□□□ -0.76
HPS4-203ENST00000402105 XDHP47989 1333 aa10.3□□□□□ -0.76
HPS4-203ENST00000402105 PMS1P54277 932 aaKnown RBP10.29□□□□□ -0.76
HPS4-203ENST00000402105 EZH2Q15910 746 aaKnown RBP10.29□□□□□ -0.76
HPS4-203ENST00000402105 APTXQ7Z2E3 356 aaKnown RBP10.29□□□□□ -0.76
HPS4-203ENST00000402105 CSGALNACT2Q8N6G5 542 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 IFT81Q8WYA0 676 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 CPVLQ9H3G5 476 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 TCRBV5S4A2TA0A5A2 114 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 GOLGA6CA6NDK9 693 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 H0YHG0 523 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 PDE8AO60658 829 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 CSF1RP07333 972 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 GOLGA6DP0CG33 693 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 ARHGAP25P42331 645 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 SPA17Q15506 151 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 MAP9Q49MG5 647 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 SHISA4Q96DD7 197 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 UBXN6Q9BZV1 441 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 LACRTQ9GZZ8 138 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 GOLGA6AQ9NYA3 693 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 ABCC6O95255 1503 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 FAM237AA0A1B0GTK4 181 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 CCDC194A0A1B0GVG4 234 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 GOLGA6BA6NDN3 693 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 KRT86O43790 486 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 MYBL2P10244 700 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 HEATR3Q7Z4Q2 680 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 CCDC42Q96M95 316 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 WDR19Q8NEZ3 1342 aa10.29□□□□□ -0.76
HPS4-203ENST00000402105 AKR1B10O60218 316 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 KIF5AQ12840 1032 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 NT5DC1Q5TFE4 455 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
HPS4-203ENST00000402105 LRWD1Q9UFC0 647 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 MAP3K15Q6ZN16 1313 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 ERVV-2B6SEH9 535 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 BUB1O43683 1085 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 PLEKP08567 350 aaPredicted RBP10.28□□□□□ -0.76
HPS4-203ENST00000402105 CYP2D6P10635 497 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 SPAG1Q07617 926 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 CDKAL1Q5VV42 579 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 PACS2Q86VP3 889 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 FAM76AQ8TAV0 307 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 IPO4Q8TEX9 1081 aaKnown RBP10.28□□□□□ -0.76
HPS4-203ENST00000402105 HDAC7Q8WUI4 952 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 FERMT2Q96AC1 680 aa10.28□□□□□ -0.76
HPS4-203ENST00000402105 NCK2O43639 380 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 GOLGA8HP0CJ92 632 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 ASIC1P78348 528 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 PKN1Q16512 942 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 INF2Q27J81 1249 aa10.27□□□□□ -0.76
HPS4-203ENST00000402105 C2CD5Q86YS7 1000 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms