RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 PMS1P54277 932 aaKnown RBP18.97■□□□□ 0.63
SGPP1-201ENST00000247225 SUSD4Q5VX71 490 aa18.97■□□□□ 0.63
SGPP1-201ENST00000247225 RASGRP2Q7LDG7 609 aa18.97■□□□□ 0.63
SGPP1-201ENST00000247225 CENPHQ9H3R5 247 aa18.97■□□□□ 0.63
SGPP1-201ENST00000247225 EHD2Q9NZN4 543 aa18.97■□□□□ 0.63
SGPP1-201ENST00000247225 XDHP47989 1333 aa18.97■□□□□ 0.63
SGPP1-201ENST00000247225 NDUFA10O95299 355 aa18.97■□□□□ 0.63
SGPP1-201ENST00000247225 PARP1P09874 1014 aaKnown RBP18.97■□□□□ 0.63
SGPP1-201ENST00000247225 IDEP14735 1019 aa18.97■□□□□ 0.63
SGPP1-201ENST00000247225 TRIML1Q8N9V2 468 aa18.97■□□□□ 0.63
SGPP1-201ENST00000247225 LAMA4Q16363 1823 aa18.96■□□□□ 0.63
SGPP1-201ENST00000247225 GOLGA8HP0CJ92 632 aa18.96■□□□□ 0.63
SGPP1-201ENST00000247225 DEF6Q9H4E7 631 aa18.96■□□□□ 0.63
SGPP1-201ENST00000247225 ATP8B1O43520 1251 aa18.96■□□□□ 0.63
SGPP1-201ENST00000247225 RPN1P04843 607 aaKnown RBP18.96■□□□□ 0.63
SGPP1-201ENST00000247225 TCP11X2Q5H9J9 407 aa18.96■□□□□ 0.63
SGPP1-201ENST00000247225 APTXQ7Z2E3 356 aaKnown RBP18.96■□□□□ 0.63
SGPP1-201ENST00000247225 FAM107BQ9H098 131 aa18.96■□□□□ 0.63
SGPP1-201ENST00000247225 ZNHIT6Q9NWK9 470 aaKnown RBP18.96■□□□□ 0.63
SGPP1-201ENST00000247225 NIP7Q9Y221 180 aaKnown RBP eCLIP18.96■□□□□ 0.63
SGPP1-201ENST00000247225 TBC1D8BQ0IIM8 1120 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 HEATR3Q7Z4Q2 680 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 TMTC2Q8N394 836 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 SAR1BQ9Y6B6 198 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 ARID5AQ03989 594 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 PKN1Q16512 942 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 GSDMAQ96QA5 445 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 FAM207AQ9NSI2 230 aaPredicted RBP18.95■□□□□ 0.62
SGPP1-201ENST00000247225 TMEM94Q12767 1356 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 MICALL1Q8N3F8 863 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 SRBD1Q8N5C6 995 aaKnown RBP18.95■□□□□ 0.62
SGPP1-201ENST00000247225 OR8K1Q8NGG5 319 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 JAKMIP2Q96AA8 810 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 TANGO6Q9C0B7 1094 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 LACRTQ9GZZ8 138 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 ACBD3Q9H3P7 528 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 STX8Q9UNK0 236 aa18.95■□□□□ 0.62
SGPP1-201ENST00000247225 SF3A3Q12874 501 aaKnown RBP eCLIP18.94■□□□□ 0.62
SGPP1-201ENST00000247225 EZH2Q15910 746 aaKnown RBP18.94■□□□□ 0.62
SGPP1-201ENST00000247225 INF2Q27J81 1249 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 MTRQ99707 1265 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 ABCC6O95255 1503 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 MRC1P22897 1456 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 CHRNDQ07001 517 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 KCTD16Q68DU8 428 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 TYW1BQ6NUM6 668 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 SND1Q7KZF4 910 aaKnown RBP eCLIP18.94■□□□□ 0.62
SGPP1-201ENST00000247225 SRLQ86TD4 932 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 MMRN2Q9H8L6 949 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 C5P01031 1676 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 FAM237AA0A1B0GTK4 181 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 CCDC194A0A1B0GVG4 234 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 GGCXP38435 758 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 ARHGAP25P42331 645 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 CSGALNACT2Q8N6G5 542 aa18.94■□□□□ 0.62
SGPP1-201ENST00000247225 AFDNP55196 1824 aaKnown RBP18.93■□□□□ 0.62
SGPP1-201ENST00000247225 PLEKP08567 350 aaPredicted RBP18.93■□□□□ 0.62
SGPP1-201ENST00000247225 STIM1Q13586 685 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 VGLL2Q8N8G2 317 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 AFAP1L1Q8TED9 768 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 STAG1Q8WVM7 1258 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 NAA15Q9BXJ9 866 aaKnown RBP18.93■□□□□ 0.62
SGPP1-201ENST00000247225 GBP3Q9H0R5 595 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 SAMM50Q9Y512 469 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 C1orf167Q5SNV9 1468 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 WDR19Q8NEZ3 1342 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 MAP2K7O14733 419 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 RAD21O60216 631 aa18.93■□□□□ 0.62
SGPP1-201ENST00000247225 POTEB2H3BUK9 544 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 TULP2O00295 520 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 MYO1BO43795 1136 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 E2F4Q16254 413 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 GOLGB1Q14789 3259 aaKnown RBP18.92■□□□□ 0.62
SGPP1-201ENST00000247225 ZEB2O60315 1214 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 SSBP05455 408 aaKnown RBP eCLIP18.92■□□□□ 0.62
SGPP1-201ENST00000247225 MYBL2P10244 700 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 LIG3P49916 1009 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 NT5DC1Q5TFE4 455 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 CCT5P48643 541 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 ATP1A2P50993 1020 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 ASIC1P78348 528 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 IL17AQ16552 155 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 CDKAL1Q5VV42 579 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 ZNF579Q8NAF0 562 aaKnown RBP18.92■□□□□ 0.62
SGPP1-201ENST00000247225 SLC4A9Q96Q91 983 aa18.92■□□□□ 0.62
SGPP1-201ENST00000247225 RNF26Q9BY78 433 aaPredicted RBP18.92■□□□□ 0.62
SGPP1-201ENST00000247225 OVOS2A0A0G2JMS6 1433 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 RIC1Q4ADV7 1423 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 LMO7Q8WWI1 1683 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 RCCD1A6NED2 376 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 ARID4AP29374 1257 aaPredicted RBP18.91■□□□□ 0.62
SGPP1-201ENST00000247225 WHAMMP3Q1A5X7 153 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 CCDC181Q5TID7 509 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 DYMQ7RTS9 669 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 FERMT2Q96AC1 680 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 BTG4Q9NY30 223 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 REXO2Q9Y3B8 237 aaKnown RBP18.91■□□□□ 0.62
SGPP1-201ENST00000247225 WDR17Q8IZU2 1322 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 RGPD5Q99666 1765 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 NKRFO15226 690 aaKnown RBP eCLIP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms