RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	YCP4	P25349	247 aa	Known RBP	3.1	□□□□□ -1.91
HAA1	YPR008W	IRC8	P47046	822 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	ASK10	P48361	1146 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	SND1	Q04007	877 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	NKP2	Q06162	153 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	AIM6	Q07716	390 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	AAD4	Q07747	329 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	NYV1	Q12255	253 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	YPR089W	O13585	888 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	COQ3	P27680	312 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	ASK1	P35734	292 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	ERC1	P38767	581 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	JHD1	P40034	492 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	YIR014W	P40570	242 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	CIR1	P42940	261 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	MAD3	P47074	515 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	LYS4	P49367	693 aa	Predicted RBP	3.1	□□□□□ -1.91
HAA1	YPR008W	ESF2	P53743	316 aa	Known RBP	3.1	□□□□□ -1.91
HAA1	YPR008W	FCP1	Q03254	732 aa		3.1	□□□□□ -1.91
HAA1	YPR008W	RAD50	P12753	1312 aa		3.09	□□□□□ -1.91
HAA1	YPR008W	FRD1	P32614	470 aa	Known RBP	3.09	□□□□□ -1.91
HAA1	YPR008W	OPY1	P38271	328 aa		3.09	□□□□□ -1.91
HAA1	YPR008W	YLF2	P38746	405 aa		3.09	□□□□□ -1.91
HAA1	YPR008W	SAW1	P39735	261 aa		3.09	□□□□□ -1.91
HAA1	YPR008W	PCI8	P40512	444 aa		3.09	□□□□□ -1.91
HAA1	YPR008W	CFD1	P40558	293 aa		3.09	□□□□□ -1.91
HAA1	YPR008W	SCS3	P53012	380 aa		3.09	□□□□□ -1.91
HAA1	YPR008W	MOT3	P54785	490 aa	Known RBP	3.09	□□□□□ -1.91
HAA1	YPR008W	RIM15	P43565	1770 aa		3.09	□□□□□ -1.92
HAA1	YPR008W	VBA2	P38358	474 aa	Known RBP	3.08	□□□□□ -1.92
HAA1	YPR008W	NPA3	P47122	385 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	YAT1	P80235	687 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	CRD1	Q07560	283 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	YOR389W	Q08912	624 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	SAC3	P46674	1301 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	SUP35	P05453	685 aa	Known RBP	3.08	□□□□□ -1.92
HAA1	YPR008W	CTT1	P06115	562 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	LNP1	P38878	278 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	PEX8	P53248	589 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	YPR003C	P53394	754 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	GET3	Q12154	354 aa	Known RBP	3.08	□□□□□ -1.92
HAA1	YPR008W	BUG1	Q12191	341 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	ARP7	Q12406	477 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	NCB2	Q92317	146 aa		3.08	□□□□□ -1.92
HAA1	YPR008W	IME2	P32581	645 aa		3.07	□□□□□ -1.92
HAA1	YPR008W	SDS22	P36047	338 aa		3.07	□□□□□ -1.92
HAA1	YPR008W	GND1	P38720	489 aa	Known RBP	3.07	□□□□□ -1.92
HAA1	YPR008W	STT3	P39007	718 aa	Known RBP	3.07	□□□□□ -1.92
HAA1	YPR008W	RAD26	P40352	1085 aa		3.07	□□□□□ -1.92
HAA1	YPR008W	LYS20	P48570	428 aa	Known RBP	3.07	□□□□□ -1.92
HAA1	YPR008W	YGL242C	P53066	181 aa		3.07	□□□□□ -1.92
HAA1	YPR008W	YOL114C	Q12322	202 aa		3.07	□□□□□ -1.92
HAA1	YPR008W	SSK22	P25390	1331 aa	Predicted RBP	3.07	□□□□□ -1.92
HAA1	YPR008W	PDR18	P53756	1333 aa		3.07	□□□□□ -1.92
HAA1	YPR008W	RRP8	P38961	392 aa	Known RBP	3.07	□□□□□ -1.92
HAA1	YPR008W	TAM41	P53230	385 aa		3.07	□□□□□ -1.92
HAA1	YPR008W	SEC18	P18759	758 aa	Known RBP	3.06	□□□□□ -1.92
HAA1	YPR008W	AIM17	P23180	465 aa	Known RBP	3.06	□□□□□ -1.92
HAA1	YPR008W	SWI4	P25302	1093 aa	Known RBP	3.06	□□□□□ -1.92
HAA1	YPR008W	RPT3	P33298	428 aa	Known RBP	3.06	□□□□□ -1.92
HAA1	YPR008W	PXL1	P36166	706 aa		3.06	□□□□□ -1.92
HAA1	YPR008W	KTR3	P38130	404 aa	Predicted RBP	3.06	□□□□□ -1.92
HAA1	YPR008W	YMR124W	P39523	943 aa	Known RBP	3.06	□□□□□ -1.92
HAA1	YPR008W	CDC1	P40986	491 aa		3.06	□□□□□ -1.92
HAA1	YPR008W	CTI6	Q08923	506 aa		3.06	□□□□□ -1.92
HAA1	YPR008W	SNU66	Q12420	587 aa	Predicted RBP	3.06	□□□□□ -1.92
HAA1	YPR008W	UTP10	P42945	1769 aa	Known RBP	3.05	□□□□□ -1.92
HAA1	YPR008W	COX1	P00401	534 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	PCT1	P13259	424 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	PTC6	P25646	442 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	YUR1	P26725	428 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	NIC96	P34077	839 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	MEP2	P41948	499 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	MLC1	P53141	149 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	DIB1	Q06819	143 aa	Predicted RBP	3.05	□□□□□ -1.92
HAA1	YPR008W	BRE1	Q07457	700 aa	Known RBP	3.05	□□□□□ -1.92
HAA1	YPR008W	YPL191C	Q08930	360 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	ILS1	P09436	1072 aa	Known RBP	3.05	□□□□□ -1.92
HAA1	YPR008W	MGM1	P32266	881 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	AAP1	P37898	856 aa	Known RBP	3.05	□□□□□ -1.92
HAA1	YPR008W	YJL107C	P42947	387 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	PIB2	P53191	635 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	RIX7	Q07844	837 aa	Known RBP	3.05	□□□□□ -1.92
HAA1	YPR008W	RIM20	Q12033	661 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	YBR255C-A	Q3E776	120 aa		3.05	□□□□□ -1.92
HAA1	YPR008W	ADE3	P07245	946 aa	Known RBP	3.04	□□□□□ -1.92
HAA1	YPR008W	SPC97	P38863	823 aa		3.04	□□□□□ -1.92
HAA1	YPR008W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	RIP-Chip
HAA1	YPR008W	SUL2	Q12325	893 aa		3.04	□□□□□ -1.92
HAA1	YPR008W	SIR1	P21691	654 aa		3.04	□□□□□ -1.92
HAA1	YPR008W	RPF2	P36160	344 aa	Known RBP	3.04	□□□□□ -1.92
HAA1	YPR008W	YGR079W	P53249	370 aa		3.04	□□□□□ -1.92
HAA1	YPR008W	YNL058C	P53947	316 aa		3.04	□□□□□ -1.92
HAA1	YPR008W	SYF1	Q04048	859 aa	Predicted RBP	3.04	□□□□□ -1.92
HAA1	YPR008W	LEA1	Q08963	238 aa	Predicted RBP	3.04	□□□□□ -1.92
HAA1	YPR008W	POM152	P39685	1337 aa		3.03	□□□□□ -1.92
HAA1	YPR008W	PIF1	P07271	859 aa		3.03	□□□□□ -1.92
HAA1	YPR008W	CNA1	P23287	553 aa		3.03	□□□□□ -1.92
HAA1	YPR008W	SIP1	P32578	815 aa		3.03	□□□□□ -1.92
HAA1	YPR008W	SPL2	P38839	148 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms