RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B YJR096WP47137 282 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YGL036WP53185 909 aaPredicted RBP0.47□□□□□ -2.33
YNL054W-BYNL054W-B BUD17P53727 317 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YLR125WQ12138 136 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YBL059WP34224 193 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B SET3P36124 751 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YHR112CP38716 378 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B FUN12P39730 1002 aaKnown RBP0.47□□□□□ -2.33
YNL054W-BYNL054W-B SNP1Q00916 300 aaPredicted RBP0.47□□□□□ -2.33
YNL054W-BYNL054W-B SDH5Q08230 162 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YPL191CQ08930 360 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B GIN4Q12263 1142 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YBR056W-AI2HB52 66 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B SMK1P41808 388 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B IDS2P46958 469 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B IML2P47031 731 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B NOP9P47077 666 aaKnown RBP0.47□□□□□ -2.33
YNL054W-BYNL054W-B YGR237CP50089 785 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YNR029CP53729 429 aaKnown RBP0.47□□□□□ -2.33
YNL054W-BYNL054W-B IES4Q08561 116 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YMR230W-AQ3E7B5 62 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B PDE1P22434 369 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B MNN2P38069 597 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YEH2Q07950 538 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B YPR027CQ12079 277 aa0.47□□□□□ -2.33
YNL054W-BYNL054W-B RPS21BQ3E754 87 aaKnown RBP0.47□□□□□ -2.33
YNL054W-BYNL054W-B SLH1P53327 1967 aaKnown RBP0.46□□□□□ -2.33
YNL054W-BYNL054W-B YCP4P25349 247 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B MRC1P25588 1096 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B IMG2P25642 146 aaPredicted RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B GCD7P32502 381 aaPredicted RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B PFA5Q03289 374 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B MCH4Q08268 501 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B ARP6Q12509 438 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B SPT15P13393 240 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B SDH3P33421 198 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B AKL1P38080 1108 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B EAF5P39995 279 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B FTR1P40088 404 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B UBP6P43593 499 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B YJR107WP47145 328 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B NHX1Q04121 633 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B LYS21Q12122 440 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B PRP4P20053 465 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B UBP11P36026 717 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B YAP3P38749 330 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B PTH1P38876 190 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B BEM4P39011 633 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B TAN1P53072 289 aaPredicted RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B RAD9P14737 1309 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B RPO41P13433 1351 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B YER190C-BP0CX94 160 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B YEL077W-AP0CX95 160 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B YGR296C-BP0CX96 160 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B YPL283W-BP0CX97 160 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B YPR204C-AP0CX98 160 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B STI1P15705 589 aaKnown RBP RIP-Chip data0.46□□□□□ -2.34not detected
YNL054W-BYNL054W-B RVS161P25343 265 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B CRM1P30822 1084 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B YKU70P32807 602 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B TAF5P38129 798 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B TPA1P40032 644 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B TDA10P42938 290 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B YFL015CP43578 164 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B EFR3Q03653 782 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B PFA4Q12006 378 aa0.46□□□□□ -2.34
YNL054W-BYNL054W-B HRP1Q99383 534 aaKnown RBP0.46□□□□□ -2.34
YNL054W-BYNL054W-B KHA1P40309 873 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B YGR283CP53336 341 aaPredicted RBP0.45□□□□□ -2.34
YNL054W-BYNL054W-B YDR338CQ05497 695 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B NSE3Q05541 303 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B PIN2Q12057 282 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B YPR096CO13587 100 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B RNR3P21672 869 aaKnown RBP0.45□□□□□ -2.34
YNL054W-BYNL054W-B ERP2P39704 215 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B HOS2P53096 452 aaPredicted RBP0.45□□□□□ -2.34
YNL054W-BYNL054W-B YGL081WP53156 320 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B YPQ1Q12010 308 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B PNO1Q99216 274 aaKnown RBP0.45□□□□□ -2.34
YNL054W-BYNL054W-B GDH1P07262 454 aaKnown RBP0.45□□□□□ -2.34
YNL054W-BYNL054W-B YMR085WP0CF18 432 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B RAD16P31244 790 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B SER1P33330 395 aaKnown RBP0.45□□□□□ -2.34
YNL054W-BYNL054W-B NDT80P38830 627 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B YHR131CP38835 850 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B MET13P53128 600 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B POM152P39685 1337 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B CMK1P27466 446 aaKnown RBP0.45□□□□□ -2.34
YNL054W-BYNL054W-B VID28P40547 921 aa0.45□□□□□ -2.34
YNL054W-BYNL054W-B DSS4P32601 143 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B MNN4P36044 1178 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B GND1P38720 489 aaKnown RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B DFG10P40526 253 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B YJR142WP47173 342 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B RRP46P53256 223 aaPredicted RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B MKC7P53379 596 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B ARK1P53974 638 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B IRC15Q02733 499 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B DIN7Q12086 430 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B RPP0P05317 312 aaKnown RBP0.44□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms