RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C Q0010Q9ZZX9 128 aa6.86□□□□□ -1.31
ATG17YLR423C BI2P03873 423 aa6.85□□□□□ -1.31
ATG17YLR423C ADE5,7P07244 802 aaKnown RBP6.85□□□□□ -1.31
ATG17YLR423C SES1P07284 462 aaKnown RBP6.85□□□□□ -1.31
ATG17YLR423C EMP70P32802 667 aa6.85□□□□□ -1.31
ATG17YLR423C NTR2P36118 322 aaPredicted RBP6.85□□□□□ -1.31
ATG17YLR423C AGP2P38090 596 aa6.85□□□□□ -1.31
ATG17YLR423C VTC2P43585 828 aa6.85□□□□□ -1.31
ATG17YLR423C SGM1P47166 707 aa6.85□□□□□ -1.31
ATG17YLR423C SLI1P53304 468 aa6.85□□□□□ -1.31
ATG17YLR423C YNR061CP53747 219 aa6.85□□□□□ -1.31
ATG17YLR423C YSP3P25036 478 aa6.84□□□□□ -1.31
ATG17YLR423C POL4P25615 582 aa6.84□□□□□ -1.31
ATG17YLR423C PTC6P25646 442 aa6.84□□□□□ -1.31
ATG17YLR423C RPC34P32910 317 aa6.84□□□□□ -1.31
ATG17YLR423C AUR1P36107 401 aaPredicted RBP6.84□□□□□ -1.31
ATG17YLR423C YIL166CP40445 542 aa6.84□□□□□ -1.31
ATG17YLR423C TDA10P42938 290 aa6.84□□□□□ -1.31
ATG17YLR423C IRC6P43615 237 aa6.84□□□□□ -1.31
ATG17YLR423C YRB30P53107 440 aaPredicted RBP6.84□□□□□ -1.31
ATG17YLR423C ARE2P53629 642 aaKnown RBP6.84□□□□□ -1.31
ATG17YLR423C APM1Q00776 475 aaPredicted RBP6.84□□□□□ -1.31
ATG17YLR423C NGL3Q03210 505 aa6.84□□□□□ -1.31
ATG17YLR423C CYK3Q07533 885 aa6.84□□□□□ -1.31
ATG17YLR423C GPN2Q08726 347 aaPredicted RBP6.84□□□□□ -1.31
ATG17YLR423C NMD4Q12129 218 aa6.84□□□□□ -1.31
ATG17YLR423C RTC1Q08281 1341 aa6.83□□□□□ -1.32
ATG17YLR423C CET1O13297 549 aaPredicted RBP6.83□□□□□ -1.32
ATG17YLR423C VMA16P23968 213 aa6.83□□□□□ -1.32
ATG17YLR423C YMC1P32331 307 aa6.83□□□□□ -1.32
ATG17YLR423C KES1P35844 434 aaKnown RBP6.83□□□□□ -1.32
ATG17YLR423C AAP1P37898 856 aaKnown RBP6.83□□□□□ -1.32
ATG17YLR423C REG2P38232 338 aa6.83□□□□□ -1.32
ATG17YLR423C SEC31P38968 1273 aaKnown RBP6.83□□□□□ -1.32
ATG17YLR423C SWP82P43554 623 aa6.83□□□□□ -1.32
ATG17YLR423C MRX6P48564 524 aa6.83□□□□□ -1.32
ATG17YLR423C MRK1P50873 501 aa6.83□□□□□ -1.32
ATG17YLR423C YGL036WP53185 909 aaPredicted RBP6.83□□□□□ -1.32
ATG17YLR423C VPS75P53853 264 aa6.83□□□□□ -1.32
ATG17YLR423C RSM28Q03430 361 aa6.83□□□□□ -1.32
ATG17YLR423C SYF1Q04048 859 aaPredicted RBP6.83□□□□□ -1.32
ATG17YLR423C LEA1Q08963 238 aaPredicted RBP6.83□□□□□ -1.32
ATG17YLR423C HXK2P04807 486 aaKnown RBP6.82□□□□□ -1.32
ATG17YLR423C ARG3P05150 338 aa6.82□□□□□ -1.32
ATG17YLR423C CBS1P14066 229 aa6.82□□□□□ -1.32
ATG17YLR423C YJU2P28320 278 aaPredicted RBP6.82□□□□□ -1.32
ATG17YLR423C EXO1P39875 702 aa6.82□□□□□ -1.32
ATG17YLR423C NPR2P39923 615 aa6.82□□□□□ -1.32
ATG17YLR423C BUR6P40096 142 aa6.82□□□□□ -1.32
ATG17YLR423C FMP30Q02883 468 aa6.82□□□□□ -1.32
ATG17YLR423C YML037CQ03703 340 aa6.82□□□□□ -1.32
ATG17YLR423C BUD22Q04347 519 aaKnown RBP6.82□□□□□ -1.32
ATG17YLR423C CIR2Q08822 631 aa6.82□□□□□ -1.32
ATG17YLR423C ERP4Q12450 207 aa6.82□□□□□ -1.32
ATG17YLR423C RED1P14291 827 aa6.81□□□□□ -1.32
ATG17YLR423C OCA4P25366 362 aa6.81□□□□□ -1.32
ATG17YLR423C GLO1P50107 326 aa6.81□□□□□ -1.32
ATG17YLR423C LCL3P53153 274 aa6.81□□□□□ -1.32
ATG17YLR423C TAF11Q04226 346 aa6.81□□□□□ -1.32
ATG17YLR423C SLK19Q08581 821 aaKnown RBP6.81□□□□□ -1.32
ATG17YLR423C RRG1Q12167 365 aaPredicted RBP6.81□□□□□ -1.32
ATG17YLR423C SCM3Q12334 223 aa6.81□□□□□ -1.32
ATG17YLR423C CKA1P15790 372 aa6.8□□□□□ -1.32
ATG17YLR423C UTP9P38882 575 aaKnown RBP6.8□□□□□ -1.32
ATG17YLR423C PHM8P40025 321 aa6.8□□□□□ -1.32
ATG17YLR423C AQY1P0CD91 305 aa6.79□□□□□ -1.32
ATG17YLR423C PCT1P13259 424 aa6.79□□□□□ -1.32
ATG17YLR423C KAR3P17119 729 aa6.79□□□□□ -1.32
ATG17YLR423C PDB1P32473 366 aaKnown RBP6.79□□□□□ -1.32
ATG17YLR423C ADE17P38009 592 aaKnown RBP6.79□□□□□ -1.32
ATG17YLR423C UBP13P38187 747 aa6.79□□□□□ -1.32
ATG17YLR423C SPO22P40511 975 aa6.79□□□□□ -1.32
ATG17YLR423C RPS7BP48164 190 aaKnown RBP6.79□□□□□ -1.32
ATG17YLR423C IST1P53843 298 aaPredicted RBP6.79□□□□□ -1.32
ATG17YLR423C INA17Q02888 182 aa6.79□□□□□ -1.32
ATG17YLR423C ARO10Q06408 635 aa6.79□□□□□ -1.32
ATG17YLR423C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
ATG17YLR423C MET17P06106 444 aa6.78□□□□□ -1.32
ATG17YLR423C SRP54P20424 541 aaKnown RBP6.78□□□□□ -1.32
ATG17YLR423C YIH1P25637 258 aa6.78□□□□□ -1.32
ATG17YLR423C YNG2P38806 282 aaKnown RBP6.78□□□□□ -1.32
ATG17YLR423C ECM10P39987 644 aa6.78□□□□□ -1.32
ATG17YLR423C YPL071CQ02864 156 aa6.78□□□□□ -1.32
ATG17YLR423C PAC2P39937 518 aa6.77□□□□□ -1.33
ATG17YLR423C RGI2P40188 164 aa6.77□□□□□ -1.33
ATG17YLR423C DPB11P47027 764 aaPredicted RBP6.77□□□□□ -1.33
ATG17YLR423C LYS4P49367 693 aaPredicted RBP6.77□□□□□ -1.33
ATG17YLR423C STR3P53101 465 aaKnown RBP6.77□□□□□ -1.33
ATG17YLR423C UTP21Q06078 939 aaPredicted RBP6.77□□□□□ -1.33
ATG17YLR423C THI3Q07471 609 aa6.77□□□□□ -1.33
ATG17YLR423C MRP2P10663 115 aaPredicted RBP6.76□□□□□ -1.33
ATG17YLR423C MSS51P32335 436 aa6.76□□□□□ -1.33
ATG17YLR423C GSH1P32477 678 aa6.76□□□□□ -1.33
ATG17YLR423C SRO77P38163 1010 aa6.76□□□□□ -1.33
ATG17YLR423C TPA1P40032 644 aaKnown RBP6.76□□□□□ -1.33
ATG17YLR423C DIA3P52290 468 aa6.76□□□□□ -1.33
ATG17YLR423C RAD34Q06665 692 aa6.76□□□□□ -1.33
ATG17YLR423C YEH1Q07804 573 aa6.76□□□□□ -1.33
ATG17YLR423C SPE2P21182 396 aa6.75□□□□□ -1.33
ATG17YLR423C APD1P38281 316 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms