RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C SNF12P53628 566 aa2.39□□□□□ -2.03
VPS13YLL040C NUP116Q02630 1113 aa2.39□□□□□ -2.03
VPS13YLL040C ADE13Q05911 482 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C DIS3Q08162 1001 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C TUB1P09733 447 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C YAP1P19880 650 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C CHA1P25379 360 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C IPT1P38954 527 aa2.38□□□□□ -2.03
VPS13YLL040C FMP32P43557 207 aa2.38□□□□□ -2.03
VPS13YLL040C SLD3P53135 668 aa2.38□□□□□ -2.03
VPS13YLL040C SED5Q01590 340 aa2.38□□□□□ -2.03
VPS13YLL040C CWC15Q03772 175 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C BLS1Q06071 122 aa2.38□□□□□ -2.03
VPS13YLL040C HSP42Q12329 375 aa2.38□□□□□ -2.03
VPS13YLL040C PMD1P32634 1753 aa2.38□□□□□ -2.03
VPS13YLL040C TFS1P14306 219 aa2.38□□□□□ -2.03
VPS13YLL040C PEP12P32854 288 aa2.38□□□□□ -2.03
VPS13YLL040C DOM34P33309 386 aa2.38□□□□□ -2.03
VPS13YLL040C SMF2P38778 549 aa2.38□□□□□ -2.03
VPS13YLL040C SEO1P39709 593 aa2.38□□□□□ -2.03
VPS13YLL040C YJL070CP40361 888 aa2.38□□□□□ -2.03
VPS13YLL040C TY4A-JP47023 414 aa2.38□□□□□ -2.03
VPS13YLL040C TPN1P53099 579 aa2.38□□□□□ -2.03
VPS13YLL040C GLO2Q05584 274 aa2.38□□□□□ -2.03
VPS13YLL040C ICL2Q12031 575 aa2.38□□□□□ -2.03
VPS13YLL040C MSB2P32334 1306 aa2.38□□□□□ -2.03
VPS13YLL040C DAP2P18962 818 aa2.38□□□□□ -2.03
VPS13YLL040C SPB1P25582 841 aaPredicted RBP2.38□□□□□ -2.03
VPS13YLL040C YCR090CP25654 182 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C DSS4P32601 143 aa2.38□□□□□ -2.03
VPS13YLL040C RPT3P33298 428 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C HMT1P38074 348 aa2.38□□□□□ -2.03
VPS13YLL040C SEC31P38968 1273 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C ALP1P38971 573 aa2.38□□□□□ -2.03
VPS13YLL040C STE24P47154 453 aa2.38□□□□□ -2.03
VPS13YLL040C SHE4P51534 789 aa2.38□□□□□ -2.03
VPS13YLL040C ZIP2P53061 704 aa2.38□□□□□ -2.03
VPS13YLL040C SFM1Q12314 213 aa2.38□□□□□ -2.03
VPS13YLL040C MAS1P10507 462 aa2.38□□□□□ -2.03
VPS13YLL040C NGG1P32494 702 aa2.38□□□□□ -2.03
VPS13YLL040C RPH1P39956 796 aa2.38□□□□□ -2.03
VPS13YLL040C SCD6P45978 349 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03 RIP-Chip
VPS13YLL040C MAD3P47074 515 aa2.38□□□□□ -2.03
VPS13YLL040C CLA4P48562 842 aa2.38□□□□□ -2.03
VPS13YLL040C SHY1P53266 389 aa2.38□□□□□ -2.03
VPS13YLL040C VAC7P53950 1165 aa2.38□□□□□ -2.03
VPS13YLL040C SMP3Q04174 516 aa2.38□□□□□ -2.03
VPS13YLL040C XYL2Q07993 356 aa2.38□□□□□ -2.03
VPS13YLL040C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
VPS13YLL040C STE2D6VTK4 431 aa2.38□□□□□ -2.03
VPS13YLL040C DED1P06634 604 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C HEM1P09950 548 aaPredicted RBP2.38□□□□□ -2.03
VPS13YLL040C TRX2P22803 104 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C YBL028CP38202 106 aa2.38□□□□□ -2.03
VPS13YLL040C ECM8P38246 354 aa2.38□□□□□ -2.03
VPS13YLL040C YPC1P38298 316 aa2.38□□□□□ -2.03
VPS13YLL040C GDT1P38301 280 aaPredicted RBP2.38□□□□□ -2.03
VPS13YLL040C HHO1P53551 258 aa2.38□□□□□ -2.03
VPS13YLL040C YPL107WQ02873 248 aa2.38□□□□□ -2.03
VPS13YLL040C TIF35Q04067 274 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C YPR097WQ06839 1073 aa2.38□□□□□ -2.03
VPS13YLL040C PSF1Q12488 208 aa2.38□□□□□ -2.03
VPS13YLL040C YOR019WQ99248 730 aa2.38□□□□□ -2.03
VPS13YLL040C GPH1P06738 902 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C NCP1P16603 691 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C RPT5P33297 434 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C MTC2P34246 357 aa2.38□□□□□ -2.03
VPS13YLL040C SRP72P38688 640 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C GGA2P38817 585 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C RTT101P47050 842 aa2.38□□□□□ -2.03
VPS13YLL040C MET7Q08645 548 aa2.38□□□□□ -2.03
VPS13YLL040C MUM3Q08750 479 aa2.38□□□□□ -2.03
VPS13YLL040C YPR096CO13587 100 aa2.38□□□□□ -2.03
VPS13YLL040C DBP3P20447 523 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C ACE2P21192 770 aa2.38□□□□□ -2.03
VPS13YLL040C ATP12P22135 325 aa2.38□□□□□ -2.03
VPS13YLL040C SSO1P32867 290 aa2.38□□□□□ -2.03
VPS13YLL040C TAT1P38085 619 aa2.38□□□□□ -2.03
VPS13YLL040C DED81P38707 554 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C COA1P40452 197 aa2.38□□□□□ -2.03
VPS13YLL040C HXT11P54862 567 aa2.38□□□□□ -2.03
VPS13YLL040C TLG1Q03322 224 aa2.38□□□□□ -2.03
VPS13YLL040C TGS1Q12052 315 aa2.38□□□□□ -2.03
VPS13YLL040C LCB4Q12246 624 aa2.38□□□□□ -2.03
VPS13YLL040C HCM1P25364 564 aa2.38□□□□□ -2.03
VPS13YLL040C PTC6P25646 442 aa2.38□□□□□ -2.03
VPS13YLL040C MEI4P29467 408 aa2.38□□□□□ -2.03
VPS13YLL040C DAL1P32375 460 aa2.38□□□□□ -2.03
VPS13YLL040C ASF2P32448 525 aaPredicted RBP2.38□□□□□ -2.03
VPS13YLL040C PRP21P32524 280 aaPredicted RBP2.38□□□□□ -2.03
VPS13YLL040C SSE2P32590 693 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C CCZ1P38273 704 aa2.38□□□□□ -2.03
VPS13YLL040C ASN2P49090 572 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C SMX3P54999 86 aaPredicted RBP2.38□□□□□ -2.03
VPS13YLL040C SPC2Q04969 178 aa2.38□□□□□ -2.03
VPS13YLL040C OSW2Q12202 724 aa2.38□□□□□ -2.03
VPS13YLL040C DBP10Q12389 995 aaKnown RBP2.38□□□□□ -2.03
VPS13YLL040C PBS2P08018 668 aa2.37□□□□□ -2.03
VPS13YLL040C ASP3-2P0CX77 362 aa2.37□□□□□ -2.03
VPS13YLL040C ASP3-3P0CX78 362 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms