RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W VMA16P23968 213 aa2.33□□□□□ -2.04
SMD1YGR074W AAD3P25612 363 aa2.33□□□□□ -2.04
SMD1YGR074W ERC1P38767 581 aa2.33□□□□□ -2.04
SMD1YGR074W IME4P41833 600 aa2.33□□□□□ -2.04
SMD1YGR074W SIP4P46954 829 aa2.33□□□□□ -2.04
SMD1YGR074W UPF3P48412 387 aaKnown RBP2.33□□□□□ -2.04
SMD1YGR074W YRB30P53107 440 aaPredicted RBP2.33□□□□□ -2.04
SMD1YGR074W DUO1P53168 247 aaKnown RBP2.33□□□□□ -2.04
SMD1YGR074W IST1P53843 298 aaPredicted RBP2.33□□□□□ -2.04
SMD1YGR074W MRPL19P53875 158 aa2.33□□□□□ -2.04
SMD1YGR074W YNL092WP53934 400 aa2.33□□□□□ -2.04
SMD1YGR074W RIM13Q03792 727 aa2.33□□□□□ -2.04
SMD1YGR074W IRC3Q06683 689 aa2.33□□□□□ -2.04
SMD1YGR074W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
SMD1YGR074W LEA1Q08963 238 aaPredicted RBP2.33□□□□□ -2.04
SMD1YGR074W YLR049CQ12110 428 aa2.33□□□□□ -2.04
SMD1YGR074W PRS5Q12265 496 aaKnown RBP2.33□□□□□ -2.04
SMD1YGR074W NOP58Q12499 511 aaKnown RBP2.33□□□□□ -2.04
SMD1YGR074W YOR019WQ99248 730 aa2.33□□□□□ -2.04
SMD1YGR074W SES1P07284 462 aaKnown RBP2.32□□□□□ -2.04
SMD1YGR074W ILS1P09436 1072 aaKnown RBP2.32□□□□□ -2.04
SMD1YGR074W YCK1P23291 538 aa2.32□□□□□ -2.04
SMD1YGR074W RRP43P25359 394 aaPredicted RBP2.32□□□□□ -2.04
SMD1YGR074W SGF29P25554 259 aa2.32□□□□□ -2.04
SMD1YGR074W AUR1P36107 401 aaPredicted RBP2.32□□□□□ -2.04
SMD1YGR074W ESL2P36168 1195 aa2.32□□□□□ -2.04
SMD1YGR074W MAL33P38157 468 aa2.32□□□□□ -2.04
SMD1YGR074W REG2P38232 338 aa2.32□□□□□ -2.04
SMD1YGR074W SEC31P38968 1273 aaKnown RBP2.32□□□□□ -2.04
SMD1YGR074W EXO1P39875 702 aa2.32□□□□□ -2.04
SMD1YGR074W PAC2P39937 518 aa2.32□□□□□ -2.04
SMD1YGR074W ESL1P40456 1118 aa2.32□□□□□ -2.04
SMD1YGR074W TDA10P42938 290 aa2.32□□□□□ -2.04
SMD1YGR074W STB2P46679 850 aa2.32□□□□□ -2.04
SMD1YGR074W MSY1P48527 492 aa2.32□□□□□ -2.04
SMD1YGR074W ADE16P54113 591 aaKnown RBP2.32□□□□□ -2.04
SMD1YGR074W YSA1Q01976 231 aa2.32□□□□□ -2.04
SMD1YGR074W YPL071CQ02864 156 aa2.32□□□□□ -2.04
SMD1YGR074W RSM28Q03430 361 aa2.32□□□□□ -2.04
SMD1YGR074W BUD22Q04347 519 aaKnown RBP2.32□□□□□ -2.04
SMD1YGR074W TDA9Q04545 1251 aa2.32□□□□□ -2.04
SMD1YGR074W YLR287CQ05881 355 aa2.32□□□□□ -2.04
SMD1YGR074W VIP1Q06685 1146 aaKnown RBP2.32□□□□□ -2.04
SMD1YGR074W RIX7Q07844 837 aaKnown RBP2.32□□□□□ -2.04
SMD1YGR074W PSK2Q08217 1101 aa2.32□□□□□ -2.04
SMD1YGR074W CTI6Q08923 506 aa2.32□□□□□ -2.04
SMD1YGR074W SEC3P33332 1336 aaKnown RBP2.32□□□□□ -2.04
SMD1YGR074W FUR1P18562 216 aaKnown RBP2.31□□□□□ -2.04
SMD1YGR074W YMC1P32331 307 aa2.31□□□□□ -2.04
SMD1YGR074W EMP70P32802 667 aa2.31□□□□□ -2.04
SMD1YGR074W MPE1P35728 441 aaKnown RBP2.31□□□□□ -2.04
SMD1YGR074W KES1P35844 434 aaKnown RBP2.31□□□□□ -2.04
SMD1YGR074W NTR2P36118 322 aaPredicted RBP2.31□□□□□ -2.04
SMD1YGR074W AAP1P37898 856 aaKnown RBP2.31□□□□□ -2.04
SMD1YGR074W UTP9P38882 575 aaKnown RBP2.31□□□□□ -2.04
SMD1YGR074W PSD1P39006 500 aa2.31□□□□□ -2.04
SMD1YGR074W FLC2P39719 783 aa2.31□□□□□ -2.04
SMD1YGR074W PHM8P40025 321 aa2.31□□□□□ -2.04
SMD1YGR074W JHD1P40034 492 aa2.31□□□□□ -2.04
SMD1YGR074W BUR6P40096 142 aa2.31□□□□□ -2.04
SMD1YGR074W NNF2P53253 936 aa2.31□□□□□ -2.04
SMD1YGR074W ZDS2P54786 942 aa2.31□□□□□ -2.04
SMD1YGR074W ORM2Q06144 216 aa2.31□□□□□ -2.04
SMD1YGR074W THI3Q07471 609 aa2.31□□□□□ -2.04
SMD1YGR074W CYK3Q07533 885 aa2.31□□□□□ -2.04
SMD1YGR074W SDH5Q08230 162 aa2.31□□□□□ -2.04
SMD1YGR074W PCL8Q08966 492 aa2.31□□□□□ -2.04
SMD1YGR074W HSH49Q99181 213 aaPredicted RBP2.31□□□□□ -2.04
SMD1YGR074W RTC1Q08281 1341 aa2.31□□□□□ -2.04
SMD1YGR074W FOB1O13329 566 aa2.3□□□□□ -2.04
SMD1YGR074W RPL19AP0CX82 189 aaKnown RBP2.3□□□□□ -2.04
SMD1YGR074W RPL19BP0CX83 189 aaPredicted RBP2.3□□□□□ -2.04
SMD1YGR074W OCA4P25366 362 aa2.3□□□□□ -2.04
SMD1YGR074W POL4P25615 582 aa2.3□□□□□ -2.04
SMD1YGR074W YKL050CP35736 922 aa2.3□□□□□ -2.04
SMD1YGR074W MUM2P38236 366 aa2.3□□□□□ -2.04
SMD1YGR074W YBR225WP38321 900 aa2.3□□□□□ -2.04
SMD1YGR074W YNG2P38806 282 aaKnown RBP2.3□□□□□ -2.04
SMD1YGR074W LTP1P40347 161 aa2.3□□□□□ -2.04
SMD1YGR074W SEC24P40482 926 aaKnown RBP2.3□□□□□ -2.04
SMD1YGR074W VTC2P43585 828 aa2.3□□□□□ -2.04
SMD1YGR074W PTR3P43606 678 aa2.3□□□□□ -2.04
SMD1YGR074W DPB11P47027 764 aaPredicted RBP2.3□□□□□ -2.04
SMD1YGR074W NET1P47035 1189 aa2.3□□□□□ -2.04
SMD1YGR074W SMC3P47037 1230 aa2.3□□□□□ -2.04
SMD1YGR074W BNA3P47039 444 aaKnown RBP2.3□□□□□ -2.04
SMD1YGR074W ORC5P50874 479 aa2.3□□□□□ -2.04
SMD1YGR074W DIA3P52290 468 aa2.3□□□□□ -2.04
SMD1YGR074W STR3P53101 465 aaKnown RBP2.3□□□□□ -2.04
SMD1YGR074W YGR066CP53242 292 aa2.3□□□□□ -2.04
SMD1YGR074W PIL1P53252 339 aaKnown RBP2.3□□□□□ -2.04
SMD1YGR074W INN1P53901 409 aa2.3□□□□□ -2.04
SMD1YGR074W PFA5Q03289 374 aa2.3□□□□□ -2.04
SMD1YGR074W YML037CQ03703 340 aa2.3□□□□□ -2.04
SMD1YGR074W MFB1Q04922 465 aa2.3□□□□□ -2.04
SMD1YGR074W HRD3Q05787 833 aa2.3□□□□□ -2.04
SMD1YGR074W TPO3Q06451 622 aa2.3□□□□□ -2.04
SMD1YGR074W IMH1Q06704 911 aaKnown RBP2.3□□□□□ -2.04
SMD1YGR074W APL4Q12028 832 aa2.3□□□□□ -2.04
SMD1YGR074W NMD4Q12129 218 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms