RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W EMP65P40085 556 aa1.38□□□□□ -2.19
SMC1YFL008W LTP1P40347 161 aa1.38□□□□□ -2.19
SMC1YFL008W MSC1Q03104 513 aa1.38□□□□□ -2.19
SMC1YFL008W ARP9Q05123 467 aa1.38□□□□□ -2.19
SMC1YFL008W YPL191CQ08930 360 aa1.38□□□□□ -2.19
SMC1YFL008W YRF1-4O13559 1382 aa1.38□□□□□ -2.19
SMC1YFL008W RPB2P08518 1224 aaKnown RBP1.38□□□□□ -2.19
SMC1YFL008W ABF1P14164 731 aa1.38□□□□□ -2.19
SMC1YFL008W HCA4P20448 770 aaKnown RBP1.38□□□□□ -2.19
SMC1YFL008W DGR2P32330 852 aa1.38□□□□□ -2.19
SMC1YFL008W BEM3P32873 1128 aa1.38□□□□□ -2.19
SMC1YFL008W GUF1P46943 645 aa1.38□□□□□ -2.19
SMC1YFL008W COP1P53622 1201 aaKnown RBP1.38□□□□□ -2.19
SMC1YFL008W NDD1Q08887 554 aa1.38□□□□□ -2.19
SMC1YFL008W PFA4Q12006 378 aa1.38□□□□□ -2.19
SMC1YFL008W MYO1P08964 1928 aa1.38□□□□□ -2.19
SMC1YFL008W RPL19AP0CX82 189 aaKnown RBP1.37□□□□□ -2.19
SMC1YFL008W RPL19BP0CX83 189 aaPredicted RBP1.37□□□□□ -2.19
SMC1YFL008W HOM2P13663 365 aaKnown RBP1.37□□□□□ -2.19
SMC1YFL008W CNA1P23287 553 aa1.37□□□□□ -2.19
SMC1YFL008W YMR147WP40218 223 aaKnown RBP1.37□□□□□ -2.19
SMC1YFL008W INN1P53901 409 aa1.37□□□□□ -2.19
SMC1YFL008W IDP3P53982 420 aaKnown RBP1.37□□□□□ -2.19
SMC1YFL008W SEC5P89102 971 aa1.37□□□□□ -2.19
SMC1YFL008W PLM2Q04383 521 aa1.37□□□□□ -2.19
SMC1YFL008W ERG11P10614 530 aa1.37□□□□□ -2.19
SMC1YFL008W LRE1P25579 583 aaKnown RBP1.37□□□□□ -2.19
SMC1YFL008W ARP2P32381 391 aaKnown RBP1.37□□□□□ -2.19
SMC1YFL008W ASK1P35734 292 aa1.37□□□□□ -2.19
SMC1YFL008W AGP2P38090 596 aa1.37□□□□□ -2.19
SMC1YFL008W TEP1P53916 434 aa1.37□□□□□ -2.19
SMC1YFL008W MLC2Q06580 163 aa1.37□□□□□ -2.19
SMC1YFL008W YDL073WQ07454 984 aa1.37□□□□□ -2.19
SMC1YFL008W SRL1Q08673 210 aa1.37□□□□□ -2.19
SMC1YFL008W MDM20Q12387 796 aaKnown RBP1.37□□□□□ -2.19
SMC1YFL008W TMT1P32643 299 aa1.37□□□□□ -2.19
SMC1YFL008W PXL1P36166 706 aa1.37□□□□□ -2.19
SMC1YFL008W HIS6P40545 261 aa1.37□□□□□ -2.19
SMC1YFL008W FET5P43561 622 aa1.37□□□□□ -2.19
SMC1YFL008W IRC8P47046 822 aa1.37□□□□□ -2.19
SMC1YFL008W LYS4P49367 693 aaPredicted RBP1.37□□□□□ -2.19
SMC1YFL008W PSP1P50896 841 aaKnown RBP1.37□□□□□ -2.19
SMC1YFL008W CRF1Q04930 467 aa1.37□□□□□ -2.19
SMC1YFL008W ADE13Q05911 482 aaKnown RBP1.37□□□□□ -2.19
SMC1YFL008W YLR455WQ06188 304 aa1.37□□□□□ -2.19
SMC1YFL008W FRE3Q08905 711 aa1.37□□□□□ -2.19
SMC1YFL008W RNA14P25298 677 aaKnown RBP1.36□□□□□ -2.19
SMC1YFL008W RPS7AP26786 190 aaKnown RBP1.36□□□□□ -2.19
SMC1YFL008W SPC34P36131 295 aa1.36□□□□□ -2.19
SMC1YFL008W ULP2P40537 1034 aaPredicted RBP1.36□□□□□ -2.19
SMC1YFL008W UPF3P48412 387 aaKnown RBP1.36□□□□□ -2.19
SMC1YFL008W CTF18P49956 741 aa1.36□□□□□ -2.19
SMC1YFL008W TMA64Q04600 565 aaKnown RBP1.36□□□□□ -2.19
SMC1YFL008W HCR1Q05775 265 aaKnown RBP1.36□□□□□ -2.19
SMC1YFL008W TLG2Q08144 397 aa1.36□□□□□ -2.19
SMC1YFL008W RPS10AQ08745 105 aaPredicted RBP1.36□□□□□ -2.19
SMC1YFL008W YMR230W-AQ3E7B5 62 aa1.36□□□□□ -2.19
SMC1YFL008W UBR2Q07963 1872 aa1.36□□□□□ -2.19
SMC1YFL008W SNT1P25357 1226 aa1.36□□□□□ -2.19
SMC1YFL008W PTC6P25646 442 aa1.36□□□□□ -2.19
SMC1YFL008W DBF20P32328 564 aa1.36□□□□□ -2.19
SMC1YFL008W RPC34P32910 317 aa1.36□□□□□ -2.19
SMC1YFL008W LOT5P34234 306 aa1.36□□□□□ -2.19
SMC1YFL008W ARN1P38731 627 aa1.36□□□□□ -2.19
SMC1YFL008W YIL024CP40543 189 aa1.36□□□□□ -2.19
SMC1YFL008W THI6P41835 540 aa1.36□□□□□ -2.19
SMC1YFL008W MFM1Q02783 413 aa1.36□□□□□ -2.19
SMC1YFL008W PSK2Q08217 1101 aa1.36□□□□□ -2.19
SMC1YFL008W COX1P00401 534 aa1.36□□□□□ -2.19
SMC1YFL008W RIT1P23796 513 aa1.36□□□□□ -2.19
SMC1YFL008W RFA2P26754 273 aaKnown RBP1.36□□□□□ -2.19
SMC1YFL008W CCT6P39079 546 aa1.36□□□□□ -2.19
SMC1YFL008W VFA1P40080 203 aa1.36□□□□□ -2.19
SMC1YFL008W YRB30P53107 440 aaPredicted RBP1.36□□□□□ -2.19
SMC1YFL008W SPE4Q12455 300 aa1.36□□□□□ -2.19
SMC1YFL008W PSK1P31374 1356 aa1.35□□□□□ -2.19
SMC1YFL008W MHP1P43638 1398 aa1.35□□□□□ -2.19
SMC1YFL008W POL3P15436 1097 aa1.35□□□□□ -2.19
SMC1YFL008W YAP1P19880 650 aaKnown RBP1.35□□□□□ -2.19
SMC1YFL008W UBC1P21734 215 aaKnown RBP1.35□□□□□ -2.19
SMC1YFL008W YCR043CP25361 127 aa1.35□□□□□ -2.19
SMC1YFL008W OCT1P35999 772 aa1.35□□□□□ -2.19
SMC1YFL008W YGR079WP53249 370 aa1.35□□□□□ -2.19
SMC1YFL008W VTC3Q02725 835 aa1.35□□□□□ -2.19
SMC1YFL008W RPM2Q02773 1202 aa1.35□□□□□ -2.19
SMC1YFL008W MLH2Q07980 695 aa1.35□□□□□ -2.19
SMC1YFL008W AIM41Q12032 185 aa1.35□□□□□ -2.19
SMC1YFL008W HER1Q12276 1246 aa1.35□□□□□ -2.19
SMC1YFL008W PTP2P29461 750 aa1.35□□□□□ -2.19
SMC1YFL008W ATS1P31386 333 aa1.35□□□□□ -2.19
SMC1YFL008W YKR075CP36155 307 aa1.35□□□□□ -2.19
SMC1YFL008W FUI1P38196 639 aa1.35□□□□□ -2.19
SMC1YFL008W AXL2P38928 823 aa1.35□□□□□ -2.19
SMC1YFL008W PYK2P52489 506 aaKnown RBP1.35□□□□□ -2.19
SMC1YFL008W HOS2P53096 452 aaPredicted RBP1.35□□□□□ -2.19
SMC1YFL008W UBX4P54730 416 aa1.35□□□□□ -2.19
SMC1YFL008W FMP30Q02883 468 aa1.35□□□□□ -2.19
SMC1YFL008W MUB1Q03162 620 aa1.35□□□□□ -2.19
SMC1YFL008W LEA1Q08963 238 aaPredicted RBP1.35□□□□□ -2.19
SMC1YFL008W SEC18P18759 758 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms