RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C GTB1Q04924 702 aa2.68□□□□□ -1.98
RTR1YER139C TAF5P38129 798 aa2.67□□□□□ -1.98
RTR1YER139C HXT9P40885 567 aa2.67□□□□□ -1.98
RTR1YER139C ICL2Q12031 575 aa2.67□□□□□ -1.98
RTR1YER139C RVB2Q12464 471 aaKnown RBP2.67□□□□□ -1.98
RTR1YER139C ADH4P10127 382 aa2.66□□□□□ -1.98
RTR1YER139C SEC31P38968 1273 aaKnown RBP2.66□□□□□ -1.98
RTR1YER139C YDL186WP48568 277 aa2.66□□□□□ -1.98
RTR1YER139C PFA5Q03289 374 aa2.66□□□□□ -1.98
RTR1YER139C NUR1Q12066 484 aa2.66□□□□□ -1.98
RTR1YER139C CHO1P08456 276 aa2.65□□□□□ -1.99
RTR1YER139C URK1P27515 501 aa2.65□□□□□ -1.99
RTR1YER139C ADE17P38009 592 aaKnown RBP2.65□□□□□ -1.99
RTR1YER139C YJL068CP40363 299 aa2.65□□□□□ -1.99
RTR1YER139C DIM1P41819 318 aaKnown RBP2.65□□□□□ -1.99
RTR1YER139C PUS4P48567 403 aaKnown RBP2.65□□□□□ -1.99
RTR1YER139C SLX4Q12098 748 aa2.65□□□□□ -1.99
RTR1YER139C FAB1P34756 2278 aa2.65□□□□□ -1.99
RTR1YER139C GDH1P07262 454 aaKnown RBP2.64□□□□□ -1.99
RTR1YER139C AGA1P32323 725 aa2.64□□□□□ -1.99
RTR1YER139C MTC6P38849 526 aa2.64□□□□□ -1.99
RTR1YER139C TAM41P53230 385 aa2.64□□□□□ -1.99
RTR1YER139C TRE2Q08693 809 aa2.64□□□□□ -1.99
RTR1YER139C BAG7Q12128 409 aa2.64□□□□□ -1.99
RTR1YER139C YGR161W-CQ3E744 92 aa2.64□□□□□ -1.99
RTR1YER139C YSP3P25036 478 aa2.63□□□□□ -1.99
RTR1YER139C GID7P25569 745 aa2.63□□□□□ -1.99
RTR1YER139C RFA2P26754 273 aaKnown RBP2.63□□□□□ -1.99
RTR1YER139C NMD2P38798 1089 aaKnown RBP2.63□□□□□ -1.99
RTR1YER139C SWD1P39706 426 aa2.63□□□□□ -1.99
RTR1YER139C RBG2P53295 368 aaKnown RBP2.63□□□□□ -1.99
RTR1YER139C MAK10Q02197 733 aa2.63□□□□□ -1.99
RTR1YER139C YPL108WQ02872 168 aaPredicted RBP2.63□□□□□ -1.99
RTR1YER139C TMA64Q04600 565 aaKnown RBP2.63□□□□□ -1.99
RTR1YER139C KAR1P11927 433 aa2.62□□□□□ -1.99
RTR1YER139C RPS2P25443 254 aaKnown RBP2.62□□□□□ -1.99
RTR1YER139C STV1P37296 890 aa2.62□□□□□ -1.99
RTR1YER139C UBP13P38187 747 aa2.62□□□□□ -1.99
RTR1YER139C RFC1P38630 861 aaKnown RBP2.62□□□□□ -1.99
RTR1YER139C PRE5P40302 234 aaKnown RBP2.62□□□□□ -1.99
RTR1YER139C YGL242CP53066 181 aa2.62□□□□□ -1.99
RTR1YER139C TKL1P23254 680 aaKnown RBP2.61□□□□□ -1.99
RTR1YER139C ERG1P32476 496 aaKnown RBP2.61□□□□□ -1.99
RTR1YER139C BUD16P39988 312 aa2.61□□□□□ -1.99
RTR1YER139C RPT2P40327 437 aaKnown RBP2.61□□□□□ -1.99
RTR1YER139C DJP1P40564 432 aa2.61□□□□□ -1.99
RTR1YER139C YJL213WP40896 331 aa2.61□□□□□ -1.99
RTR1YER139C GUF1P46943 645 aa2.61□□□□□ -1.99
RTR1YER139C FRD1P32614 470 aaKnown RBP2.6□□□□□ -1.99
RTR1YER139C SDS22P36047 338 aa2.6□□□□□ -1.99
RTR1YER139C MIC60P36112 540 aa2.6□□□□□ -1.99
RTR1YER139C ERG7P38604 731 aa2.6□□□□□ -1.99
RTR1YER139C SAW1P39735 261 aa2.6□□□□□ -1.99
RTR1YER139C YJL132WP47014 750 aa2.6□□□□□ -1.99
RTR1YER139C YDL218WQ07629 317 aa2.6□□□□□ -1.99
RTR1YER139C RPL15AP05748 204 aaKnown RBP2.59□□□□□ -1.99
RTR1YER139C RPB8P20436 146 aa2.59□□□□□ -1.99
RTR1YER139C PTH1P38876 190 aaKnown RBP2.59□□□□□ -1.99
RTR1YER139C YTP1P53584 459 aa2.59□□□□□ -1.99
RTR1YER139C HCR1Q05775 265 aaKnown RBP2.59□□□□□ -1.99
RTR1YER139C PET111P08468 800 aa2.58□□□□□ -2
RTR1YER139C CLB2P24869 491 aa2.58□□□□□ -2
RTR1YER139C ATS1P31386 333 aa2.58□□□□□ -2
RTR1YER139C PHM6Q05637 104 aa2.58□□□□□ -2
RTR1YER139C SAC1P32368 623 aaKnown RBP2.57□□□□□ -2
RTR1YER139C HXT1P32465 570 aa2.57□□□□□ -2
RTR1YER139C YER130CP39959 443 aa2.57□□□□□ -2
RTR1YER139C NUP100Q02629 959 aa2.57□□□□□ -2
RTR1YER139C ATG21Q02887 496 aa2.57□□□□□ -2
RTR1YER139C MTG1Q03151 367 aaPredicted RBP2.57□□□□□ -2
RTR1YER139C SWA2Q06677 668 aa2.57□□□□□ -2
RTR1YER139C RAP1P11938 827 aa2.56□□□□□ -2
RTR1YER139C AGP2P38090 596 aa2.56□□□□□ -2
RTR1YER139C YBR071WP38243 211 aa2.56□□□□□ -2
RTR1YER139C RPH1P39956 796 aa2.56□□□□□ -2
RTR1YER139C YEN1P40028 759 aa2.56□□□□□ -2
RTR1YER139C RGI2P40188 164 aa2.56□□□□□ -2
RTR1YER139C CAB2P40506 365 aa2.56□□□□□ -2
RTR1YER139C COS10P52924 374 aa2.56□□□□□ -2
RTR1YER139C YML003WP0CF16 290 aa2.55□□□□□ -2
RTR1YER139C MCK1P21965 375 aaKnown RBP2.55□□□□□ -2
RTR1YER139C MCM3P24279 971 aaKnown RBP2.55□□□□□ -2
RTR1YER139C IKS1P47042 667 aa2.55□□□□□ -2
RTR1YER139C ATG23Q06671 453 aa2.55□□□□□ -2
RTR1YER139C YOL159CQ08300 171 aa2.55□□□□□ -2
RTR1YER139C SUL2Q12325 893 aa2.55□□□□□ -2
RTR1YER139C SET6Q12529 373 aa2.55□□□□□ -2
RTR1YER139C SRP54P20424 541 aaKnown RBP2.54□□□□□ -2
RTR1YER139C LRE1P25579 583 aaKnown RBP2.54□□□□□ -2
RTR1YER139C YEL045CP32616 141 aa2.54□□□□□ -2
RTR1YER139C SPC34P36131 295 aa2.54□□□□□ -2
RTR1YER139C YBP1P38315 674 aa2.54□□□□□ -2
RTR1YER139C TIF5P38431 405 aaKnown RBP2.54□□□□□ -2
RTR1YER139C YIL060WP40519 144 aa2.54□□□□□ -2
RTR1YER139C YFR016CP43597 1233 aaKnown RBP2.54□□□□□ -2
RTR1YER139C DCP2P53550 970 aaKnown RBP2.54□□□□□ -2
RTR1YER139C STP3Q05937 343 aa2.54□□□□□ -2
RTR1YER139C PET122P10355 254 aa2.53□□□□□ -2
RTR1YER139C KRS1P15180 591 aaKnown RBP2.53□□□□□ -2
RTR1YER139C RRP3P38712 501 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 199.6 ms