RNA–Protein interactions for RNA: YDL132W

CDC53, Transcript of Cullin, yeastyeast

Gene CDC53, Length 2,448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC53YDL132W RIA1P53893 1110 aa2.24□□□□□ -2.05
CDC53YDL132W ZDS2P54786 942 aa2.24□□□□□ -2.05
CDC53YDL132W ERB1Q04660 807 aaKnown RBP2.24□□□□□ -2.05
CDC53YDL132W ARG7Q04728 441 aa2.24□□□□□ -2.05
CDC53YDL132W GTB1Q04924 702 aa2.24□□□□□ -2.05
CDC53YDL132W ATG23Q06671 453 aa2.24□□□□□ -2.05
CDC53YDL132W CDA2Q06703 312 aa2.24□□□□□ -2.05
CDC53YDL132W YDL073WQ07454 984 aa2.24□□□□□ -2.05
CDC53YDL132W YDL242WQ07746 117 aa2.24□□□□□ -2.05
CDC53YDL132W YLR040CQ07988 224 aa2.24□□□□□ -2.05
CDC53YDL132W PRS5Q12265 496 aaKnown RBP2.24□□□□□ -2.05
CDC53YDL132W PGA3Q12746 312 aaKnown RBP2.24□□□□□ -2.05
CDC53YDL132W YOL159C-AQ3E769 90 aa2.24□□□□□ -2.05
CDC53YDL132W GAL80P04387 435 aa2.23□□□□□ -2.05
CDC53YDL132W SIR3P06701 978 aa2.23□□□□□ -2.05
CDC53YDL132W ARD1P07347 238 aaPredicted RBP2.23□□□□□ -2.05
CDC53YDL132W RPL3P14126 387 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W RNR3P21672 869 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W GDA1P32621 518 aa2.23□□□□□ -2.05
CDC53YDL132W TFB1P32776 642 aa2.23□□□□□ -2.05
CDC53YDL132W NPL6P32832 435 aa2.23□□□□□ -2.05
CDC53YDL132W DJP1P40564 432 aa2.23□□□□□ -2.05
CDC53YDL132W INP52P50942 1183 aa2.23□□□□□ -2.05
CDC53YDL132W VID30P53076 958 aa2.23□□□□□ -2.05
CDC53YDL132W SNF12P53628 566 aa2.23□□□□□ -2.05
CDC53YDL132W IPI3P53877 555 aa2.23□□□□□ -2.05
CDC53YDL132W CIK1Q01649 594 aa2.23□□□□□ -2.05
CDC53YDL132W RSM28Q03430 361 aa2.23□□□□□ -2.05
CDC53YDL132W IRC3Q06683 689 aa2.23□□□□□ -2.05
CDC53YDL132W CRT10Q08226 957 aa2.23□□□□□ -2.05
CDC53YDL132W GPN2Q08726 347 aaPredicted RBP2.23□□□□□ -2.05
CDC53YDL132W HIF1Q12373 385 aa2.23□□□□□ -2.05
CDC53YDL132W PAR32Q12515 295 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W YBR255C-AQ3E776 120 aa2.23□□□□□ -2.05
CDC53YDL132W HXK2P04807 486 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W PPR1P07272 904 aaPredicted RBP2.23□□□□□ -2.05
CDC53YDL132W ILV2P07342 687 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W AMD2P22580 549 aa2.23□□□□□ -2.05
CDC53YDL132W CNE1P27825 502 aa2.23□□□□□ -2.05
CDC53YDL132W LAC1P28496 418 aa2.23□□□□□ -2.05
CDC53YDL132W PAP1P29468 568 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W SOF1P33750 489 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W LHS1P36016 881 aa2.23□□□□□ -2.05
CDC53YDL132W RXT2P38255 430 aa2.23□□□□□ -2.05
CDC53YDL132W SMF1P38925 575 aa2.23□□□□□ -2.05
CDC53YDL132W GDI1P39958 451 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W MAM1P40065 302 aa2.23□□□□□ -2.05
CDC53YDL132W ARG2P40360 574 aa2.23□□□□□ -2.05
CDC53YDL132W NDC80P40460 691 aa2.23□□□□□ -2.05
CDC53YDL132W CTK2P46962 323 aa2.23□□□□□ -2.05
CDC53YDL132W BUL1P48524 976 aa2.23□□□□□ -2.05
CDC53YDL132W DIA3P52290 468 aa2.23□□□□□ -2.05
CDC53YDL132W ATG4P53867 494 aa2.23□□□□□ -2.05
CDC53YDL132W ADE16P54113 591 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W YDR179W-AQ03983 463 aa2.23□□□□□ -2.05
CDC53YDL132W VPS38Q05919 439 aa2.23□□□□□ -2.05
CDC53YDL132W YEH1Q07804 573 aa2.23□□□□□ -2.05
CDC53YDL132W AHA1Q12449 350 aaKnown RBP2.23□□□□□ -2.05
CDC53YDL132W YJR112W-AQ3E743 109 aa2.23□□□□□ -2.05
CDC53YDL132W YPT6Q99260 215 aa2.23□□□□□ -2.05
CDC53YDL132W CET1O13297 549 aaPredicted RBP2.22□□□□□ -2.05
CDC53YDL132W HSP82P02829 709 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W PRP6P19735 899 aaPredicted RBP2.22□□□□□ -2.05
CDC53YDL132W CLB1P24868 471 aa2.22□□□□□ -2.05
CDC53YDL132W RNQ1P25367 405 aa2.22□□□□□ -2.05
CDC53YDL132W MDL1P33310 695 aa2.22□□□□□ -2.05
CDC53YDL132W SEF1P34228 1148 aa2.22□□□□□ -2.05
CDC53YDL132W TSA1P34760 196 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W KES1P35844 434 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W GMH1P36125 273 aa2.22□□□□□ -2.05
CDC53YDL132W MNN2P38069 597 aa2.22□□□□□ -2.05
CDC53YDL132W VID24P38263 362 aa2.22□□□□□ -2.05
CDC53YDL132W OTU2P38747 307 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W LRP1P38801 184 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W GIP4P39732 760 aa2.22□□□□□ -2.05
CDC53YDL132W SAP1P39955 897 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W ALG5P40350 334 aa2.22□□□□□ -2.05
CDC53YDL132W DCP2P53550 970 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W RPS15Q01855 142 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W GFD1Q04839 188 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W FMP40Q08968 688 aaPredicted RBP2.22□□□□□ -2.05
CDC53YDL132W SPE4Q12455 300 aa2.22□□□□□ -2.05
CDC53YDL132W AFI1Q99222 893 aa2.22□□□□□ -2.05
CDC53YDL132W DFR1P07807 211 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
CDC53YDL132W STE4P18851 423 aa2.22□□□□□ -2.05
CDC53YDL132W ANP1P32629 500 aa2.22□□□□□ -2.05
CDC53YDL132W NTR2P36118 322 aaPredicted RBP2.22□□□□□ -2.05
CDC53YDL132W ERC1P38767 581 aa2.22□□□□□ -2.05
CDC53YDL132W BUD16P39988 312 aa2.22□□□□□ -2.05
CDC53YDL132W LAS21P40367 830 aa2.22□□□□□ -2.05
CDC53YDL132W MET18P40469 1032 aa2.22□□□□□ -2.05
CDC53YDL132W SWP82P43554 623 aa2.22□□□□□ -2.05
CDC53YDL132W PET130P47065 347 aa2.22□□□□□ -2.05
CDC53YDL132W STR3P53101 465 aaKnown RBP2.22□□□□□ -2.05
CDC53YDL132W MNP1P53163 194 aaPredicted RBP2.22□□□□□ -2.05
CDC53YDL132W YGR016WP53209 190 aa2.22□□□□□ -2.05
CDC53YDL132W NNF2P53253 936 aa2.22□□□□□ -2.05
CDC53YDL132W MAK10Q02197 733 aa2.22□□□□□ -2.05
CDC53YDL132W WAR1Q03631 944 aa2.22□□□□□ -2.05
CDC53YDL132W PLM2Q04383 521 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms