RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W PDR8Q06149 701 aa3.97□□□□□ -1.77
UBC9YDL064W YOL159CQ08300 171 aa3.97□□□□□ -1.77
UBC9YDL064W YCR006CP25350 157 aa3.96□□□□□ -1.78
UBC9YDL064W CHS3P29465 1165 aa3.96□□□□□ -1.78
UBC9YDL064W KTR3P38130 404 aaPredicted RBP3.96□□□□□ -1.78
UBC9YDL064W PHM8P40025 321 aa3.96□□□□□ -1.78
UBC9YDL064W ASG1P40467 964 aa3.96□□□□□ -1.78
UBC9YDL064W ORC5P50874 479 aa3.96□□□□□ -1.78
UBC9YDL064W YML122CQ03207 126 aa3.96□□□□□ -1.78
UBC9YDL064W RSM28Q03430 361 aa3.96□□□□□ -1.78
UBC9YDL064W IRC3Q06683 689 aa3.96□□□□□ -1.78
UBC9YDL064W NUS1Q12063 375 aa3.96□□□□□ -1.78
UBC9YDL064W SAN1P22470 610 aa3.95□□□□□ -1.78
UBC9YDL064W GFD2P25370 566 aaKnown RBP3.95□□□□□ -1.78
UBC9YDL064W ESL2P36168 1195 aa3.95□□□□□ -1.78
UBC9YDL064W AAP1P37898 856 aaKnown RBP3.95□□□□□ -1.78
UBC9YDL064W SEC31P38968 1273 aaKnown RBP3.95□□□□□ -1.78
UBC9YDL064W SLZ1P40167 298 aa3.95□□□□□ -1.78
UBC9YDL064W YJL107CP42947 387 aa3.95□□□□□ -1.78
UBC9YDL064W MUB1Q03162 620 aa3.95□□□□□ -1.78
UBC9YDL064W FRE3Q08905 711 aa3.95□□□□□ -1.78
UBC9YDL064W GPA1P08539 472 aa3.94□□□□□ -1.78
UBC9YDL064W CDC16P09798 840 aa3.94□□□□□ -1.78
UBC9YDL064W COQ3P27680 312 aa3.94□□□□□ -1.78
UBC9YDL064W MSS51P32335 436 aa3.94□□□□□ -1.78
UBC9YDL064W LHS1P36016 881 aa3.94□□□□□ -1.78
UBC9YDL064W PXL1P36166 706 aa3.94□□□□□ -1.78
UBC9YDL064W ARN1P38731 627 aa3.94□□□□□ -1.78
UBC9YDL064W FLO5P38894 1075 aa3.94□□□□□ -1.78
UBC9YDL064W VPS41P38959 992 aa3.94□□□□□ -1.78
UBC9YDL064W ECM10P39987 644 aa3.94□□□□□ -1.78
UBC9YDL064W JHD1P40034 492 aa3.94□□□□□ -1.78
UBC9YDL064W SNO3P43544 222 aa3.94□□□□□ -1.78
UBC9YDL064W YFR020WP43600 232 aa3.94□□□□□ -1.78
UBC9YDL064W BNA3P47039 444 aaKnown RBP3.94□□□□□ -1.78
UBC9YDL064W COP1P53622 1201 aaKnown RBP3.94□□□□□ -1.78
UBC9YDL064W SUB1P54000 292 aaKnown RBP3.94□□□□□ -1.78
UBC9YDL064W YSA1Q01976 231 aa3.94□□□□□ -1.78
UBC9YDL064W RAD30Q04049 632 aa3.94□□□□□ -1.78
UBC9YDL064W YKU80Q04437 629 aa3.94□□□□□ -1.78
UBC9YDL064W GET3Q12154 354 aaKnown RBP3.94□□□□□ -1.78
UBC9YDL064W CRC1Q12289 327 aa3.94□□□□□ -1.78
UBC9YDL064W YBR085C-AO43137 85 aa3.93□□□□□ -1.78
UBC9YDL064W MRP2P10663 115 aaPredicted RBP3.93□□□□□ -1.78
UBC9YDL064W AAC3P18238 307 aa3.93□□□□□ -1.78
UBC9YDL064W YAP1P19880 650 aaKnown RBP3.93□□□□□ -1.78
UBC9YDL064W SOF1P33750 489 aaKnown RBP3.93□□□□□ -1.78
UBC9YDL064W OCT1P35999 772 aa3.93□□□□□ -1.78
UBC9YDL064W YPT53P36019 220 aa3.93□□□□□ -1.78
UBC9YDL064W ULP2P40537 1034 aaPredicted RBP3.93□□□□□ -1.78
UBC9YDL064W LYS4P49367 693 aaPredicted RBP3.93□□□□□ -1.78
UBC9YDL064W BSC5P53755 489 aa3.93□□□□□ -1.78
UBC9YDL064W ERG13P54839 491 aaKnown RBP3.93□□□□□ -1.78
UBC9YDL064W PFA5Q03289 374 aa3.93□□□□□ -1.78
UBC9YDL064W YLR455WQ06188 304 aa3.93□□□□□ -1.78
UBC9YDL064W RIX7Q07844 837 aaKnown RBP3.93□□□□□ -1.78
UBC9YDL064W MCH4Q08268 501 aa3.93□□□□□ -1.78
UBC9YDL064W SKM1Q12469 655 aa3.93□□□□□ -1.78
UBC9YDL064W PAH1P32567 862 aa3.92□□□□□ -1.78
UBC9YDL064W MRX1P40050 688 aa3.92□□□□□ -1.78
UBC9YDL064W YIL024CP40543 189 aa3.92□□□□□ -1.78
UBC9YDL064W ARC1P46672 376 aaKnown RBP3.92□□□□□ -1.78
UBC9YDL064W AAD10P47182 288 aa3.92□□□□□ -1.78
UBC9YDL064W UPF3P48412 387 aaKnown RBP3.92□□□□□ -1.78
UBC9YDL064W PIG1Q06216 648 aa3.92□□□□□ -1.78
UBC9YDL064W NBP2Q12163 236 aa3.92□□□□□ -1.78
UBC9YDL064W RRI1Q12468 440 aa3.92□□□□□ -1.78
UBC9YDL064W ENT1Q12518 454 aa3.92□□□□□ -1.78
UBC9YDL064W RPL19AP0CX82 189 aaKnown RBP3.91□□□□□ -1.78
UBC9YDL064W RPL19BP0CX83 189 aaPredicted RBP3.91□□□□□ -1.78
UBC9YDL064W YER190C-BP0CX94 160 aa3.91□□□□□ -1.78
UBC9YDL064W YEL077W-AP0CX95 160 aa3.91□□□□□ -1.78
UBC9YDL064W YGR296C-BP0CX96 160 aa3.91□□□□□ -1.78
UBC9YDL064W YPL283W-BP0CX97 160 aa3.91□□□□□ -1.78
UBC9YDL064W YPR204C-AP0CX98 160 aa3.91□□□□□ -1.78
UBC9YDL064W CDC24P11433 854 aaPredicted RBP3.91□□□□□ -1.78
UBC9YDL064W TKL1P23254 680 aaKnown RBP3.91□□□□□ -1.78
UBC9YDL064W ECM32P32644 1121 aaKnown RBP3.91□□□□□ -1.78
UBC9YDL064W BUR6P40096 142 aa3.91□□□□□ -1.78
UBC9YDL064W PSA1P41940 361 aaKnown RBP3.91□□□□□ -1.78
UBC9YDL064W CTK2P46962 323 aa3.91□□□□□ -1.78
UBC9YDL064W DUO1P53168 247 aaKnown RBP3.91□□□□□ -1.78
UBC9YDL064W EAF7P53911 425 aaKnown RBP3.91□□□□□ -1.78
UBC9YDL064W ECM22Q05958 814 aaPredicted RBP3.91□□□□□ -1.78
UBC9YDL064W SKG3Q06315 1026 aa3.91□□□□□ -1.78
UBC9YDL064W YLR049CQ12110 428 aa3.91□□□□□ -1.78
UBC9YDL064W ATG9Q12142 997 aa3.91□□□□□ -1.78
UBC9YDL064W YOR111WQ99210 232 aa3.91□□□□□ -1.78
UBC9YDL064W CNA1P23287 553 aa3.9□□□□□ -1.79
UBC9YDL064W YCK1P23291 538 aa3.9□□□□□ -1.79
UBC9YDL064W PTP1P25044 335 aa3.9□□□□□ -1.79
UBC9YDL064W STE50P25344 346 aa3.9□□□□□ -1.79
UBC9YDL064W CDC15P27636 974 aa3.9□□□□□ -1.79
UBC9YDL064W MNN2P38069 597 aa3.9□□□□□ -1.79
UBC9YDL064W MAL33P38157 468 aa3.9□□□□□ -1.79
UBC9YDL064W NOP16P40007 231 aaKnown RBP3.9□□□□□ -1.79
UBC9YDL064W TPA1P40032 644 aaKnown RBP3.9□□□□□ -1.79
UBC9YDL064W YTP1P53584 459 aa3.9□□□□□ -1.79
UBC9YDL064W ASI1P54074 624 aa3.9□□□□□ -1.79
UBC9YDL064W KAR3P17119 729 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms