RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	LCB4	Q12246	624 aa		4.57	□□□□□ -1.68
SHE3	YBR130C	AHA1	Q12449	350 aa	Known RBP	4.57	□□□□□ -1.68
SHE3	YBR130C	AI5_ALPHA	Q9ZZX1	630 aa		4.57	□□□□□ -1.68
SHE3	YBR130C	HXK2	P04807	486 aa	Known RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	ILV2	P07342	687 aa	Known RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SHE3	YBR130C	PDB1	P32473	366 aa	Known RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	AAP1	P37898	856 aa	Known RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	MOH1	P38191	138 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	VBA2	P38358	474 aa	Known RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	ERC1	P38767	581 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	SEC31	P38968	1273 aa	Known RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	PHM8	P40025	321 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	TPA1	P40032	644 aa	Known RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	RGI2	P40188	164 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	MSY1	P48527	492 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	STB4	P50104	949 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	STR3	P53101	465 aa	Known RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	IST1	P53843	298 aa	Predicted RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	YML119W	Q03208	357 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	YML037C	Q03703	340 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	SXM1	Q04175	944 aa	Known RBP	4.56	□□□□□ -1.68
SHE3	YBR130C	PLM2	Q04383	521 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	YLR352W	Q06479	807 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	GRC3	Q07845	632 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	TAF3	Q12297	353 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	YJR112W-A	Q3E743	109 aa		4.56	□□□□□ -1.68
SHE3	YBR130C	MET17	P06106	444 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	POL4	P25615	582 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	YIH1	P25637	258 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	VMA8	P32610	256 aa	Known RBP	4.55	□□□□□ -1.68
SHE3	YBR130C	GDA1	P32621	518 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	ORC2	P32833	620 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	UBP11	P36026	717 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	NTR2	P36118	322 aa	Predicted RBP	4.55	□□□□□ -1.68
SHE3	YBR130C	YMC2	P38087	329 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	SRP72	P38688	640 aa	Known RBP	4.55	□□□□□ -1.68
SHE3	YBR130C	SEC24	P40482	926 aa	Known RBP	4.55	□□□□□ -1.68
SHE3	YBR130C	AXL1	P40851	1208 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	VID30	P53076	958 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	YNL092W	P53934	400 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	NGL3	Q03210	505 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	YEH1	Q07804	573 aa		4.55	□□□□□ -1.68
SHE3	YBR130C	CET1	O13297	549 aa	Predicted RBP	4.54	□□□□□ -1.68
SHE3	YBR130C	RPN13	O13563	156 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	SPE2	P21182	396 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	ROX1	P25042	368 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	ADH7	P25377	361 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	MTH1	P35198	433 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	MUP3	P38734	546 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	SAP1	P39955	897 aa	Known RBP	4.54	□□□□□ -1.68
SHE3	YBR130C	YML6	P51998	286 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	YNR061C	P53747	219 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	RCF1	Q03713	159 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	RIM20	Q12033	661 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	RTN2	Q12443	393 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	SMC6	Q12749	1114 aa		4.54	□□□□□ -1.68
SHE3	YBR130C	PDX1	P16451	410 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	REC107	P21651	314 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	CLB3	P24870	427 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	ERG3	P32353	365 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	DIA4	P38705	446 aa	Predicted RBP	4.53	□□□□□ -1.68
SHE3	YBR130C	OTU2	P38747	307 aa	Known RBP	4.53	□□□□□ -1.68
SHE3	YBR130C	BUR6	P40096	142 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	SDS3	P40505	327 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	RPN11	P43588	306 aa	Known RBP	4.53	□□□□□ -1.68
SHE3	YBR130C	ROK1	P45818	564 aa	Predicted RBP	4.53	□□□□□ -1.68
SHE3	YBR130C	YGL117W	P53133	265 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	ADE16	P54113	591 aa	Known RBP	4.53	□□□□□ -1.68
SHE3	YBR130C	RSM28	Q03430	361 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	YMR155W	Q03795	547 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	GPN2	Q08726	347 aa	Predicted RBP	4.53	□□□□□ -1.68
SHE3	YBR130C	CIR2	Q08822	631 aa		4.53	□□□□□ -1.68
SHE3	YBR130C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SHE3	YBR130C	FMP40	Q08968	688 aa	Predicted RBP	4.53	□□□□□ -1.68
SHE3	YBR130C	RPL7A	P05737	244 aa	Known RBP	4.52	□□□□□ -1.69
SHE3	YBR130C	KAR3	P17119	729 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	PTC6	P25646	442 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	SWI3	P32591	825 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	RKM3	P38222	552 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	UIP3	P39547	235 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	MIT1	P40002	666 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	CCT7	P42943	550 aa	Known RBP	4.52	□□□□□ -1.69
SHE3	YBR130C	DPB11	P47027	764 aa	Predicted RBP	4.52	□□□□□ -1.69
SHE3	YBR130C	ASN1	P49089	572 aa	Known RBP	4.52	□□□□□ -1.69
SHE3	YBR130C	DIA3	P52290	468 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	YGL036W	P53185	909 aa	Predicted RBP	4.52	□□□□□ -1.69
SHE3	YBR130C	RSC1	P53236	928 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	YGR127W	P53275	312 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	RAD33	Q04231	177 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	GET3	Q12154	354 aa	Known RBP	4.52	□□□□□ -1.69
SHE3	YBR130C	RPL7B	Q12213	244 aa	Known RBP	4.52	□□□□□ -1.69
SHE3	YBR130C	ISA2	Q12425	185 aa		4.52	□□□□□ -1.69
SHE3	YBR130C	BI2	P03873	423 aa		4.51	□□□□□ -1.69
SHE3	YBR130C	HEM1	P09950	548 aa	Predicted RBP	4.51	□□□□□ -1.69
SHE3	YBR130C	HOM3	P10869	527 aa		4.51	□□□□□ -1.69
SHE3	YBR130C	STE12	P13574	688 aa		4.51	□□□□□ -1.69
SHE3	YBR130C	RRP43	P25359	394 aa	Predicted RBP	4.51	□□□□□ -1.69
SHE3	YBR130C	VID24	P38263	362 aa		4.51	□□□□□ -1.69
SHE3	YBR130C	PKP1	P40530	394 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms