RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 PPP2R5DQ14738 602 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 SUPT20HL1Q3ZLR7 823 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 ZBTB8OSQ8IWT0 167 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 TRERF1Q96PN7 1200 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 SNX14Q9Y5W7 946 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-219ENST00000606715 CROCC2H7BZ55 1655 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 ALDH3A1P30838 453 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 VPS72Q15906 364 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 SPDYE2Q495Y8 402 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 ZBTB33Q86T24 672 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 FAM227BQ96M60 508 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 ZSWIM4Q9H7M6 989 aa12.27□□□□□ -0.45
SHANK2-219ENST00000606715 ATF7P17544 494 aaPredicted RBP12.26□□□□□ -0.45
SHANK2-219ENST00000606715 IPO4Q8TEX9 1081 aaKnown RBP12.26□□□□□ -0.45
SHANK2-219ENST00000606715 NSRP1Q9H0G5 558 aaKnown RBP12.26□□□□□ -0.45
SHANK2-219ENST00000606715 DNM3Q9UQ16 869 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 ERCC5P28715 1186 aaPredicted RBP12.26□□□□□ -0.45
SHANK2-219ENST00000606715 UTP14CQ5TAP6 766 aaKnown RBP12.26□□□□□ -0.45
SHANK2-219ENST00000606715 NCOA3Q9Y6Q9 1424 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 SORBS3O60504 671 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 PDE6AP16499 860 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 TMOD1P28289 359 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 PIK3AP1Q6ZUJ8 805 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 MYCT1Q8N699 235 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 SPOPO43791 374 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 RRP9O43818 475 aaKnown RBP12.26□□□□□ -0.45
SHANK2-219ENST00000606715 STX17P56962 302 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 CFAP57Q96MR6 1250 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 FAM107BQ9H098 131 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 SWAP70Q9UH65 585 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 CDC42BPBQ9Y5S2 1711 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 GALNT17Q6IS24 598 aa12.26□□□□□ -0.45
SHANK2-219ENST00000606715 ZNF853P0CG23 659 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 HSPA4P34932 840 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 SCNN1DP51172 638 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 YWHAEP62258 255 aaKnown RBP12.25□□□□□ -0.45
SHANK2-219ENST00000606715 IFRD2Q12894 506 aaPredicted RBP12.25□□□□□ -0.45
SHANK2-219ENST00000606715 PIGBQ92521 554 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 CCDC6Q16204 474 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 MIER3Q7Z3K6 550 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 RPS6KC1Q96S38 1066 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
SHANK2-219ENST00000606715 C1orf167Q5SNV9 1468 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 FLOT1O75955 427 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 CALCOCO2Q13137 446 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 TTC14Q96N46 770 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 GREM2Q9H772 168 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 KRT86O43790 486 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 SYT1P21579 422 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 GYG1P46976 350 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 CNNM4Q6P4Q7 775 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 CCDC25Q86WR0 208 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 C16orf45Q96MC5 204 aaPredicted RBP12.25□□□□□ -0.45
SHANK2-219ENST00000606715 ZBED2Q9BTP6 218 aa12.25□□□□□ -0.45
SHANK2-219ENST00000606715 MKRN1Q9UHC7 482 aaKnown RBP12.25□□□□□ -0.45
SHANK2-219ENST00000606715 CUTAO60888 179 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 UAP1Q16222 522 aaPredicted RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 DCUN1D2Q6PH85 259 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 SESTD1Q86VW0 696 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 EAF2Q96CJ1 260 aaPredicted RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 PIM2Q9P1W9 311 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 USP17L12C9JPN9 530 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 USP17L21D6R901 530 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 ADCY5O95622 1261 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 ARID4AP29374 1257 aaPredicted RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 PPP2R5CQ13362 524 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 ZSCAN23Q3MJ62 389 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 MCF2L2Q86YR7 1114 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 DIS3L2Q8IYB7 885 aaKnown RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 IFNL3Q8IZI9 196 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 TTLL6Q8N841 843 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 ZNF274Q96GC6 653 aaPredicted RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 MTRF1LQ9UGC7 380 aaKnown RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 IGBP1P78318 339 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 ANO1Q5XXA6 986 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 GPATCH11Q8N954 259 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 OTUD7AQ8TE49 926 aaPredicted RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 MASTLQ96GX5 879 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 TRIM7Q9C029 511 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 HSPA1LP34931 641 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 FAM160A1Q05DH4 1040 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 PLCB4Q15147 1175 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 CCDC89Q8N998 374 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 MRPL11Q9Y3B7 192 aaKnown RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 E7EWF7 191 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 GAS7O60861 476 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 XRCC6P12956 609 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
SHANK2-219ENST00000606715 TTC38Q5R3I4 469 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 KIAA1841Q6NSI8 718 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 GIMAP6Q6P9H5 292 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 MICAL1Q8TDZ2 1067 aa12.24□□□□□ -0.45
SHANK2-219ENST00000606715 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CEP152O94986 1710 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 TNNI1P19237 187 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 BTDP43251 543 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms