RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 CYP27A1Q02318 531 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 REXO2Q9Y3B8 237 aaKnown RBP11.83□□□□□ -0.52
SCAF4-203ENST00000434667 ATP8B1O43520 1251 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 PTPREP23469 700 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 KRT9P35527 623 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 GGCXP38435 758 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 CPLX2Q6PUV4 134 aaKnown RBP11.83□□□□□ -0.52
SCAF4-203ENST00000434667 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 HDAC7Q8WUI4 952 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 NAPGQ99747 312 aaPredicted RBP11.83□□□□□ -0.52
SCAF4-203ENST00000434667 GREM2Q9H772 168 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 WTIPA6NIX2 430 aaPredicted RBP11.83□□□□□ -0.52
SCAF4-203ENST00000434667 MINDY4BA8MYZ0 360 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 MBD4O95243 580 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 MMP1P03956 469 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 TUBB4AP04350 444 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 CCT5P48643 541 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 SARSP49591 514 aaKnown RBP11.83□□□□□ -0.52
SCAF4-203ENST00000434667 SLC7A5Q01650 507 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 C2orf54Q08AI8 447 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 TCIRG1Q13488 830 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 KRT31Q15323 416 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 TTC31Q49AM3 519 aaPredicted RBP11.83□□□□□ -0.52
SCAF4-203ENST00000434667 RRAGBQ5VZM2 374 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 RRP36Q96EU6 259 aaKnown RBP11.83□□□□□ -0.52
SCAF4-203ENST00000434667 RUFY1Q96T51 708 aa11.83□□□□□ -0.52
SCAF4-203ENST00000434667 MACROD2A1Z1Q3 448 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 CXCR5P32302 372 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 FBXW10Q5XX13 1052 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 IFNL2Q8IZJ0 200 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 MAGEB6Q8N7X4 407 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 MLKLQ8NB16 471 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 PAGE5Q96GU1 130 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 MYO6Q9UM54 1294 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 NUP98P52948 1817 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 RCCD1A6NED2 376 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 CEP112Q8N8E3 955 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 CNNM1Q9NRU3 951 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 MYH8P13535 1937 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 GOLGA6L9A6NEM1 432 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 PDE2AO00408 941 aaPredicted RBP11.82□□□□□ -0.52
SCAF4-203ENST00000434667 SETQ01105 290 aaPredicted RBP11.82□□□□□ -0.52
SCAF4-203ENST00000434667 CUL4BQ13620 913 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
SCAF4-203ENST00000434667 GNL3LQ9NVN8 582 aaKnown RBP11.82□□□□□ -0.52
SCAF4-203ENST00000434667 JRKLQ9Y4A0 524 aa11.82□□□□□ -0.52
SCAF4-203ENST00000434667 PDE6AP16499 860 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 ADD2P35612 726 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 SAFBQ15424 915 aaKnown RBP eCLIP11.81□□□□□ -0.52
SCAF4-203ENST00000434667 TOM1L2Q6ZVM7 507 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 SDR42E1Q8WUS8 393 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 PPP1R3GB7ZBB8 358 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 ERLIN1O75477 346 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 RASGRP2Q7LDG7 609 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 NAPBQ9H115 298 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 ABHD10Q9NUJ1 306 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 RAB21Q9UL25 225 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 IPO7O95373 1038 aaKnown RBP11.81□□□□□ -0.52
SCAF4-203ENST00000434667 MSANTD4Q8NCY6 345 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 KAT2BQ92831 832 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 LACRTQ9GZZ8 138 aa11.81□□□□□ -0.52
SCAF4-203ENST00000434667 KAT6BQ8WYB5 2073 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 EIF3JO75822 258 aaKnown RBP11.8□□□□□ -0.52
SCAF4-203ENST00000434667 PMS1P54277 932 aaKnown RBP11.8□□□□□ -0.52
SCAF4-203ENST00000434667 UBXN1Q04323 297 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 IFIT5Q13325 482 aaKnown RBP11.8□□□□□ -0.52
SCAF4-203ENST00000434667 RTN1Q16799 776 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 SPATA1Q5VX52 437 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 KAT14Q9H8E8 782 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 PP2D1A8MPX8 630 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 CDKL5O76039 1030 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 PLEKHA8P1O95397 391 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 SSBP05455 408 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCAF4-203ENST00000434667 HLFQ16534 295 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 RNF187Q5TA31 235 aaPredicted RBP11.8□□□□□ -0.52
SCAF4-203ENST00000434667 KCTD16Q68DU8 428 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 KRT26Q7Z3Y9 468 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 PANX2Q96RD6 677 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 MTRQ99707 1265 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 TNS3Q68CZ2 1445 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 TTC26A0AVF1 554 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 PDE6BP35913 854 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 ICE2Q659A1 982 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 IFNL3Q8IZI9 196 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
SCAF4-203ENST00000434667 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
SCAF4-203ENST00000434667 ITGA6P23229 1130 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 TDO2P48775 406 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 CTR9Q6PD62 1173 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 LCORLQ8N3X6 602 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 AFAP1L1Q8TED9 768 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 AGPAT5Q9NUQ2 364 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 COL24A1Q17RW2 1714 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 SCN7AQ01118 1682 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 FMNL1O95466 1100 aaPredicted RBP11.79□□□□□ -0.52
SCAF4-203ENST00000434667 MCM7P33993 719 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 ATP1A2P50993 1020 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 CCDC122Q5T0U0 273 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms