RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SUGP1Q8IWZ8 645 aaKnown RBP15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 NOA1Q8NC60 698 aaKnown RBP15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 TAOK3Q9H2K8 898 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 TARSL2A2RTX5 802 aaKnown RBP15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 ARID5AQ03989 594 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 NCAPHQ15003 741 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 TBC1D31Q96DN5 1066 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 MAP2K7O14733 419 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 EIF3HO15372 352 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 RASGRP2Q7LDG7 609 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 ANKLE2Q86XL3 938 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 IP6K1Q92551 441 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 STMN4Q9H169 189 aaPredicted RBP15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 SLC4A4Q9Y6R1 1079 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 SEMA3EO15041 775 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 GUCY2DQ02846 1103 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 APOA5Q6Q788 366 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 TRIM6Q9C030 488 aaPredicted RBP15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 ANKZF1Q9H8Y5 726 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 PXDNLA1KZ92 1463 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 SMIM23A6NLE4 172 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 CTDNEP1O95476 244 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 CTNNA1P35221 906 aaKnown RBP15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 C2CD5Q86YS7 1000 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 XAGE2Q96GT9 111 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 IFT74Q96LB3 600 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 KIAA0753Q2KHM9 967 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 KRT71Q3SY84 523 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 ZNF594Q96JF6 807 aaPredicted RBP15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 PLIN2Q99541 437 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 HDAC6Q9UBN7 1215 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 KIF28PB7ZC32 967 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 MEFVO15553 781 aaPredicted RBP15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 SLC5A1P13866 664 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 KRT31Q15323 416 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 DTHD1Q6ZMT9 781 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 CAMSAP1Q5T5Y3 1602 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 FOXN1O15353 648 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 MTMR3Q13615 1198 aa15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 SYMPKQ92797 1274 aaKnown RBP15.47■□□□□ 0.07
CLTCL1-201ENST00000412649 ZC3H6P61129 1189 aaKnown RBP15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 SLC7A5Q01650 507 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 EXOSC10Q01780 885 aaKnown RBP15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 ACTN3Q08043 901 aaPredicted RBP15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 SEPT7Q16181 437 aaKnown RBP15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 SPAG5Q96R06 1193 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 FAM53CQ9NYF3 392 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 RFX7Q2KHR2 1363 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 LRRIQ3A6PVS8 624 aaPredicted RBP15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 M0R2C6 588 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 USP5P45974 858 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 ATP11AP98196 1134 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 SLC24A3Q9HC58 644 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 KLC4Q9NSK0 619 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 RAB21Q9UL25 225 aa15.46■□□□□ 0.07
CLTCL1-201ENST00000412649 A0A1B0GTH6 734 aa15.46■□□□□ 0.06
CLTCL1-201ENST00000412649 ERCC3P19447 782 aa15.46■□□□□ 0.06
CLTCL1-201ENST00000412649 ELF1P32519 619 aa15.46■□□□□ 0.06
CLTCL1-201ENST00000412649 ZAP70P43403 619 aa15.46■□□□□ 0.06
CLTCL1-201ENST00000412649 ZNF790Q6PG37 636 aa15.46■□□□□ 0.06
CLTCL1-201ENST00000412649 IFNL2Q8IZJ0 200 aa15.46■□□□□ 0.06
CLTCL1-201ENST00000412649 ABCA9Q8IUA7 1624 aa15.46■□□□□ 0.06
CLTCL1-201ENST00000412649 CLTAP09496 248 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 PPP1R2P41236 205 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 NFATC2IPQ8NCF5 419 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 CCDC26Q8TAB7 109 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 FOXP1Q9H334 677 aaPredicted RBP15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 NEURL4Q96JN8 1562 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 VWDEQ8N2E2 1590 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 GTPBP6O43824 516 aaPredicted RBP15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 NEFHP12036 1026 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 FMR1Q06787 632 aaKnown RBP eCLIP15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 GPIHBP1Q8IV16 184 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 RAB34Q9BZG1 259 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 PRR29P0C7W0 189 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 STIM2Q9P246 746 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 CALML3P27482 149 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 PDE4DQ08499 809 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 SF3A3Q12874 501 aaKnown RBP eCLIP15.45■□□□□ 0.063e-8■■■■■ 54.4
CLTCL1-201ENST00000412649 NR1I3Q14994 352 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 NBPF6Q5VWK0 638 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 FBF1Q8TES7 1133 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 IQCDQ96DY2 449 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 SIRT1Q96EB6 747 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 NBPF4Q96M43 638 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 EPB41L5Q9HCM4 733 aa15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 SRPRBQ9Y5M8 271 aaKnown RBP15.45■□□□□ 0.06
CLTCL1-201ENST00000412649 MROH7-TTC4A0A0A0MT08 1334 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 HEXIM1O94992 359 aaKnown RBP15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 PTPREP23469 700 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 ZKSCAN8Q15776 578 aaPredicted RBP15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 WDR93Q6P2C0 686 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 HOOK3Q86VS8 718 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 LMBR1Q8WVP7 490 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 MMS19Q96T76 1030 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 ANO9A1A5B4 782 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 RPS6KA5O75582 802 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 PARP1P09874 1014 aaKnown RBP15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 CALM1P0DP23 149 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms