RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 CEP104O60308 925 aa19.11■□□□□ 0.65
SGCB-201ENST00000381431 SIK1P57059 783 aa19.11■□□□□ 0.65
SGCB-201ENST00000381431 MORC3Q14149 939 aa19.11■□□□□ 0.65
SGCB-201ENST00000381431 SND1Q7KZF4 910 aaKnown RBP eCLIP19.11■□□□□ 0.65
SGCB-201ENST00000381431 FNBP4Q8N3X1 1017 aaPredicted RBP19.11■□□□□ 0.65
SGCB-201ENST00000381431 DDX39AO00148 427 aaKnown RBP19.11■□□□□ 0.65
SGCB-201ENST00000381431 CFBP00751 764 aa19.11■□□□□ 0.65
SGCB-201ENST00000381431 RASGRP4Q8TDF6 673 aa19.11■□□□□ 0.65
SGCB-201ENST00000381431 CCDC77Q9BR77 488 aa19.11■□□□□ 0.65
SGCB-201ENST00000381431 TNFAIP3P21580 790 aa19.1■□□□□ 0.65
SGCB-201ENST00000381431 ZSWIM5Q9P217 1185 aa19.1■□□□□ 0.65
SGCB-201ENST00000381431 ADD2P35612 726 aa19.1■□□□□ 0.65
SGCB-201ENST00000381431 DPP8Q6V1X1 898 aaPredicted RBP19.1■□□□□ 0.65
SGCB-201ENST00000381431 INCENPQ9NQS7 918 aa19.1■□□□□ 0.65
SGCB-201ENST00000381431 KIF4AO95239 1232 aa19.1■□□□□ 0.65
SGCB-201ENST00000381431 MED23Q9ULK4 1368 aa19.1■□□□□ 0.65
SGCB-201ENST00000381431 CCDC169A6NNP5 214 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 SPOPO43791 374 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 DYNLL1P63167 89 aaKnown RBP19.09■□□□□ 0.65
SGCB-201ENST00000381431 ASIC2Q16515 512 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 SPATA1Q5VX52 437 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 ANKRD13CQ8N6S4 541 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 AFAP1L1Q8TED9 768 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 DNM3Q9UQ16 869 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 CPSF1Q10570 1443 aaKnown RBP19.09■□□□□ 0.65
SGCB-201ENST00000381431 ECM2O94769 699 aaPredicted RBP19.09■□□□□ 0.65
SGCB-201ENST00000381431 BIRC3Q13489 604 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 RDH13Q8NBN7 331 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 SAR1BQ9Y6B6 198 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 TUBB2AQ13885 445 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 PPP1R7Q15435 360 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 PTPROQ16827 1216 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 TUBB2BQ9BVA1 445 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 PCDHB13Q9Y5F0 798 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 NLRP1Q9C000 1473 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 FRMPD2Q68DX3 1309 aaPredicted RBP19.09■□□□□ 0.65
SGCB-201ENST00000381431 GABPB1Q06547 395 aaPredicted RBP19.09■□□□□ 0.65
SGCB-201ENST00000381431 CALCOCO2Q13137 446 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 ARID5BQ14865 1188 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 LRRC47Q8N1G4 583 aaKnown RBP19.09■□□□□ 0.65
SGCB-201ENST00000381431 AXIN2Q9Y2T1 843 aa19.09■□□□□ 0.65
SGCB-201ENST00000381431 NDUFAB1O14561 156 aa19.08■□□□□ 0.65
SGCB-201ENST00000381431 CYP27B1O15528 508 aa19.08■□□□□ 0.65
SGCB-201ENST00000381431 NAP1L4Q99733 375 aaKnown RBP19.08■□□□□ 0.65
SGCB-201ENST00000381431 LZTS2Q9BRK4 669 aa19.08■□□□□ 0.65
SGCB-201ENST00000381431 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.08■□□□□ 0.65
SGCB-201ENST00000381431 VWA3BQ502W6 1294 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 NLRP10Q86W26 655 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 TRIML1Q8N9V2 468 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 SLC39A2Q9NP94 309 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 MTRF1LQ9UGC7 380 aaKnown RBP19.08■□□□□ 0.64
SGCB-201ENST00000381431 CYP2D7A0A087X1C5 515 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 GOLGA6CA6NDK9 693 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 GOLGA6DP0CG33 693 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 ATP1A3P13637 1013 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 TOB2Q14106 344 aaPredicted RBP19.08■□□□□ 0.64
SGCB-201ENST00000381431 CCDC121Q6ZUS5 278 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 KCNK9Q9NPC2 374 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 GOLGA6AQ9NYA3 693 aa19.08■□□□□ 0.64
SGCB-201ENST00000381431 ARHGEF35A5YM69 484 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 TRPM1Q7Z4N2 1603 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 CRKLP46109 303 aaKnown RBP19.07■□□□□ 0.64
SGCB-201ENST00000381431 NBPF14Q5TI25 921 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 LCORLQ8N3X6 602 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 FBF1Q8TES7 1133 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 JDP2Q8WYK2 163 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 GCNT3O95395 438 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 CASP14P31944 242 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 SF3A3Q12874 501 aaKnown RBP eCLIP19.07■□□□□ 0.64
SGCB-201ENST00000381431 MYCT1Q8N699 235 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 GPR161Q8N6U8 529 aaKnown RBP19.07■□□□□ 0.64
SGCB-201ENST00000381431 PPP1R14CQ8TAE6 165 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 GOLGA6BA6NDN3 693 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 KRT5P13647 590 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 CEP57Q86XR8 500 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 CCDC26Q8TAB7 109 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 CARD10Q9BWT7 1032 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 USP40Q9NVE5 1235 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 MTUS1Q9ULD2 1270 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 KIF1BO60333 1816 aa19.07■□□□□ 0.64
SGCB-201ENST00000381431 SETD1BQ9UPS6 1966 aaKnown RBP19.06■□□□□ 0.64
SGCB-201ENST00000381431 USPL1Q5W0Q7 1092 aa19.06■□□□□ 0.64
SGCB-201ENST00000381431 SYNE4Q8N205 404 aa19.06■□□□□ 0.64
SGCB-201ENST00000381431 EXOC3O60645 756 aa19.06■□□□□ 0.64
SGCB-201ENST00000381431 CCDC114Q96M63 670 aa19.06■□□□□ 0.64
SGCB-201ENST00000381431 GTPBP6O43824 516 aaPredicted RBP19.06■□□□□ 0.64
SGCB-201ENST00000381431 MRPL44Q9H9J2 332 aaKnown RBP19.06■□□□□ 0.64
SGCB-201ENST00000381431 PCDHA12Q9UN75 941 aa19.06■□□□□ 0.64
SGCB-201ENST00000381431 ERCC6L2Q5T890 1561 aa19.06■□□□□ 0.64
SGCB-201ENST00000381431 CCDC51Q96ER9 411 aa19.05■□□□□ 0.64
SGCB-201ENST00000381431 IQCGQ9H095 443 aaKnown RBP19.05■□□□□ 0.64
SGCB-201ENST00000381431 RPN1P04843 607 aaKnown RBP19.05■□□□□ 0.64
SGCB-201ENST00000381431 OR52Z1P0C646 297 aa19.05■□□□□ 0.64
SGCB-201ENST00000381431 DNM2P50570 870 aa19.05■□□□□ 0.64
SGCB-201ENST00000381431 SCNN1DP51172 638 aa19.05■□□□□ 0.64
SGCB-201ENST00000381431 SFMBT2Q5VUG0 894 aa19.05■□□□□ 0.64
SGCB-201ENST00000381431 PPP1R13BQ96KQ4 1090 aa19.05■□□□□ 0.64
SGCB-201ENST00000381431 PSDA5PKW4 1024 aaPredicted RBP19.05■□□□□ 0.64
SGCB-201ENST00000381431 H7C1D1 291 aa19.05■□□□□ 0.64
SGCB-201ENST00000381431 STX10O60499 249 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms