RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 TNS2Q63HR2 1409 aa16.52■□□□□ 0.23
SMTN-202ENST00000347557 PKD1L3Q7Z443 1732 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 USP17L12C9JPN9 530 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 USP17L21D6R901 530 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 HNRNPH2P55795 449 aaKnown RBP16.51■□□□□ 0.23
SMTN-202ENST00000347557 PKN1Q16512 942 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 RNF26Q9BY78 433 aaPredicted RBP16.51■□□□□ 0.23
SMTN-202ENST00000347557 SUGCTQ9HAC7 445 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 ATP6V1AP38606 617 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 CUL4BQ13620 913 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 LONRF2Q1L5Z9 754 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 ZNF34Q8IZ26 560 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 AATFQ9NY61 560 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMTN-202ENST00000347557 AKAP11Q9UKA4 1901 aa16.51■□□□□ 0.23
SMTN-202ENST00000347557 JAKMIP3Q5VZ66 844 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 ADD3Q9UEY8 706 aaKnown RBP16.5■□□□□ 0.23
SMTN-202ENST00000347557 MFAP3LO75121 409 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 PHACTR2O75167 634 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 CYP2C19P33261 490 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 TXLNAP40222 546 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 LMAN1P49257 510 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 SMIM5Q71RC9 77 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 CTCFLQ8NI51 663 aaPredicted RBP16.5■□□□□ 0.23
SMTN-202ENST00000347557 RASGRP4Q8TDF6 673 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 RABGGTAQ92696 567 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 GUCA1BQ9UMX6 200 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 KRT31Q15323 416 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 TFR2Q9UP52 801 aa16.5■□□□□ 0.23
SMTN-202ENST00000347557 ADAMTSL3P82987 1691 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 CTAGE9A4FU28 777 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 PPP1R3GB7ZBB8 358 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 RNF225M0QZC1 329 aaPredicted RBP16.49■□□□□ 0.23
SMTN-202ENST00000347557 ADAMTS3O15072 1205 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 GYPCP04921 128 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 SEC23AQ15436 765 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 GPIHBP1Q8IV16 184 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 PANX2Q96RD6 677 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 GDAQ9Y2T3 454 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 RTL9Q8NET4 1388 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 IL6STP40189 918 aaPredicted RBP16.49■□□□□ 0.23
SMTN-202ENST00000347557 KCNQ4P56696 695 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 RSRC2Q7L4I2 434 aaKnown RBP16.49■□□□□ 0.23
SMTN-202ENST00000347557 PHF20Q9BVI0 1012 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.49■□□□□ 0.23
SMTN-202ENST00000347557 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
SMTN-202ENST00000347557 KRT9P35527 623 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 UBXN1Q04323 297 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 SRGAP1Q7Z6B7 1085 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 IQUBQ8NA54 791 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
SMTN-202ENST00000347557 TRIM10Q9UDY6 481 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 TULP2O00295 520 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 CYP2D6P10635 497 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 APTXQ7Z2E3 356 aaKnown RBP16.48■□□□□ 0.23
SMTN-202ENST00000347557 ANKRD20A12PQ8NF67 263 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 NELFBQ8WX92 580 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 CTAGE1Q96RT6 745 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
SMTN-202ENST00000347557 ZNF142P52746 1687 aaPredicted RBP16.48■□□□□ 0.23
SMTN-202ENST00000347557 PNPLA7Q6ZV29 1317 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 TRIM49BA6NDI0 452 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMTN-202ENST00000347557 CNGA4Q8IV77 575 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 GSDMAQ96QA5 445 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 FUT8Q9BYC5 575 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 PDE11AQ9HCR9 933 aa16.48■□□□□ 0.23
SMTN-202ENST00000347557 ERVV-1B6SEH8 477 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 ENC1O14682 589 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
SMTN-202ENST00000347557 SKIDA1Q1XH10 827 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 SRBD1Q8N5C6 995 aaKnown RBP16.47■□□□□ 0.23
SMTN-202ENST00000347557 FERMT2Q96AC1 680 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 PNKPQ96T60 521 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 TFCP2L1Q9NZI6 479 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 VPS18Q9P253 973 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 CDC23Q9UJX2 597 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 MYH7P12883 1935 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 GPS2Q13227 327 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
SMTN-202ENST00000347557 XDHP47989 1333 aa16.47■□□□□ 0.23
SMTN-202ENST00000347557 TSPY2A6NKD2 308 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 PP2D1A8MPX8 630 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 PRPF3O43395 683 aaKnown RBP16.46■□□□□ 0.23
SMTN-202ENST00000347557 PAK1Q13153 545 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 NCAPH2Q6IBW4 605 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 SPATA20Q8TB22 786 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 CCDC102AQ96A19 550 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 CHP1Q99653 195 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 KCNJ18B7U540 433 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 H3BQF6 201 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 ERVK-24P63145 666 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 KCNJ12Q14500 433 aa16.46■□□□□ 0.23
SMTN-202ENST00000347557 STAT6P42226 847 aa16.45■□□□□ 0.22
SMTN-202ENST00000347557 COPB1P53618 953 aaKnown RBP16.45■□□□□ 0.22
SMTN-202ENST00000347557 ELOA2Q8IYF1 753 aaPredicted RBP16.45■□□□□ 0.22
SMTN-202ENST00000347557 CAPZA3Q96KX2 299 aa16.45■□□□□ 0.22
SMTN-202ENST00000347557 GDAP1L1Q96MZ0 367 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms