RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Gm1993A6X8I0 212 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 SlxD3Z347 212 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 DnttP09838 530 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Kif22Q3V300 660 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Kcnf1Q7TSH7 493 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 PcQ05920 1178 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 MaeaQ4VC33 396 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Cyp7b1Q60991 507 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 SetQ9EQU5 289 aaKnown RBP14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Nr2e3Q9QXZ7 395 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ubr1O70481 1757 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Zscan18E9PUD6 809 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Spata5Q3UMC0 893 aaKnown RBP14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Mum1l1Q4VA55 681 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Fxr1Q61584 677 aaKnown RBP14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Wdr3Q8BHB4 942 aaKnown RBP14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 VmacQ8BP01 174 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Lonp2Q9DBN5 852 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Dnajb6O54946 365 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 LdhaP06151 332 aaKnown RBP14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 NfixP70257 488 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Cct6aP80317 531 aaKnown RBP14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ctr9Q62018 1173 aaKnown RBP14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Krt40Q6IFX3 439 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Tmem179Q8BHH9 233 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Gtf3c5Q8R2T8 520 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Uso1Q9Z1Z0 959 aaKnown RBP14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Kctd1Q5M956 257 aa14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 AdnpQ9Z103 1108 aaKnown RBP14.85□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Casp12O08736 419 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Alppl2P24823 529 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 NppbP40753 121 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Nf2P46662 596 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Pcdha7Q91Y13 937 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Tmem132aQ922P8 1018 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Rps6ka4Q9Z2B9 773 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Med1Q925J9 1575 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ift172Q6VH22 1749 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Gm38392E9Q2A2 434 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Vmn2r68L7N2B3 851 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Cyp3a25O09158 503 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 LarsQ8BMJ2 1178 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Cep85Q8BMK0 761 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Rab11fip4Q8BQP8 635 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Smtnl1Q99LM3 459 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Lman1Q9D0F3 517 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Trmt44Q9D2Q2 713 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Nol7Q9D7Z3 254 aaKnown RBP14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Zfp853A0A1D5RM95 733 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Stag2O35638 1231 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Mybl2P48972 704 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Fermt2Q8CIB5 680 aa14.84□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 1700018F24RikB2RW27 314 aa14.83□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Slc39a2G3X943 309 aa14.83□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Actn3O88990 900 aaKnown RBP14.83□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Gjb4Q02738 266 aa14.83□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Dcaf17Q3TUL7 519 aa14.83□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Herc4Q6PAV2 1057 aa14.83□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Saal1Q9D2C2 474 aa14.83□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Capn12Q9ER56 720 aa14.83□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Gucy1a2F8VQK3 730 aa14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Snd1Q78PY7 910 aaKnown RBP14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Ccz1Q8C1Y8 480 aa14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Gm10134F6ZQC6 126 aa14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Etf1Q8BWY3 437 aaKnown RBP14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Ccdc73Q8CDM4 1066 aa14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Tbc1d23Q8K0F1 684 aa14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Enox2Q8R0Z2 598 aa14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Cacnb1Q8R3Z5 597 aa14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Gpr108Q91WD0 569 aa14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Ercc4Q9QZD4 917 aa14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 CoblQ5NBX1 1337 aaKnown RBP14.83□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Tspyl3Q3UYP3 334 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Sh3d21Q7TSG5 549 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Dydc1Q9D9T0 175 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Cpb1B2RS76 415 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Tcerg1lQ3B807 590 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Zrsr2Q62377 462 aaKnown RBP14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Sestd1Q80UK0 696 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Ppp2r2cQ8BG02 447 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 MypopQ8R4U1 393 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Galnt15Q9D2N8 638 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 TfrcQ62351 763 aaKnown RBP14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Q66JV7 365 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Tspyl4Q8VD63 406 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 SnrkQ8VDU5 748 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Fbxo3Q9DC63 480 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Cabp5Q9JLK3 173 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Plcb1Q9Z1B3 1216 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 MetP16056 1379 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Snap25P60879 206 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Q3TYL0 343 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Trak2Q6P9N8 913 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Exoc8Q6PGF7 716 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Smc1bQ920F6 1248 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Mtmr2Q9Z2D1 643 aa14.82□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Crb1Q8VHS2 1405 aa14.81□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Aak1Q3UHJ0 959 aa14.81□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Ccdc42Q5SV66 316 aa14.81□□□□□ -0.04
Pdgfra-205ENSMUST00000201711 Dhx40Q6PE54 779 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms