RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Atp12aQ9Z1W8 1035 aa8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Tcof1O08784 1320 aaKnown RBP8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Cyp2c67Q569X9 491 aa8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Map3k12Q60700 888 aa8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Krt40Q6IFX3 439 aa8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Recql4Q75NR7 1216 aaKnown RBP8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Atad2Q8CDM1 1040 aa8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Cgref1Q8R1U2 281 aa8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Terf2ipQ91VL8 393 aa8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Mis12Q9CY25 206 aa8.48□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Kif13bA0A286YCV9 1847 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Lama4P97927 1816 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Gm3893E9Q1I1 302 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Mdh1P14152 334 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Nap1l1P28656 391 aaKnown RBP8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Sdc2P43407 202 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Irx1P81068 480 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Atp8b1Q148W0 1251 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Snd1Q78PY7 910 aaKnown RBP8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Luc7l2Q7TNC4 392 aaKnown RBP8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Zswim4Q8C7B8 1101 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Alg3Q8K2A8 438 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 ParnQ8VDG3 624 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Krt84Q99M73 603 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Dydc1Q9D9T0 175 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Tulp1Q9Z273 543 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Klrk1O54709 232 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Stx8O88983 236 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 EgfrQ01279 1210 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Kcnd1Q03719 651 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Aak1Q3UHJ0 959 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Ift88Q61371 824 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Prc1Q99K43 603 aaKnown RBP8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Card14Q99KF0 999 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Cyp2ab1S4R196 498 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Gm43638A0A0J9YU36 694 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Apba2P98084 750 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Acbd5Q5XG73 508 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Usp50Q6P8X6 390 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Erlin2Q8BFZ9 340 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 NapgQ9CWZ7 312 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 1700018B08RikQ9DA83 213 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 PdclQ9DBX2 301 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Dusp10Q9ESS0 483 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Cxcl11Q9JHH5 100 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Jag1Q9QXX0 1218 aa8.47□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Pus7B7ZNL8 666 aaKnown RBP8.46□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Rfc1P35601 1131 aa8.46□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Cdc23Q8BGZ4 597 aa8.46□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Kiaa1524Q8BWY9 907 aa8.46□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Golph3lQ8R088 285 aaKnown RBP8.46□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Klhl40Q9D783 621 aa8.46□□□□□ -1.05
Bdnf-203ENSMUST00000111043 Mtmr2Q9Z2D1 643 aa8.46□□□□□ -1.05
Bdnf-203ENSMUST00000111043 NesQ6P5H2 1864 aaKnown RBP8.46□□□□□ -1.05
Bdnf-203ENSMUST00000111043 C4bP01029 1738 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Col11a2Q64739 1736 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Gm36210A0A1B0GS00 229 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Dnajc21E9Q8D0 531 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ampd3O08739 766 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Slc1a4O35874 532 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Cyp26a1O55127 497 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Pip4k2aO70172 405 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Exosc10P56960 887 aaKnown RBP8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Pald1P70261 859 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ankrd40Q5SUE8 363 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Trim6Q8BGE7 488 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 IarsQ8BU30 1262 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Hgh1Q8C3I8 393 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Wasf1Q8R5H6 559 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Mrps25Q9D125 171 aaKnown RBP8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 SyncQ9EPM5 470 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Pik3ap1Q9EQ32 811 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Dctpp1Q9QY93 170 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 CenphQ9QYM8 241 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Myo3bQ1EG27 1305 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Dnai2A2AC93 623 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ccdc6D3YZP9 469 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Gtf2f1Q3THK3 508 aaKnown RBP8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Znf653Q6YND2 615 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Tmem59lQ7TNI2 337 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ncaph2Q8BSP2 607 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Alx1Q8C8B0 326 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 SdsQ8VBT2 327 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Adcy3Q8VHH7 1145 aa8.46□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Frmd7A2AD83 703 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Eif6O55135 245 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Pde6aP27664 859 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Pfkfb1P70266 471 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ccdc174Q3U155 467 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Fam196bQ6GQV1 535 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Tmem179Q8BHH9 233 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Tango6Q8C3S2 1079 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Nek9Q8K1R7 984 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Paf1Q8K2T8 535 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Arl8aQ8VEH3 186 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Mei1Q9D4I2 1268 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Lmbr1Q9JIT0 490 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Adgra3Q7TT36 1310 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Cyp3a59D3Z2W7 503 aa8.45□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Epb41l2O70318 988 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms