Protein–RNA interactions for Protein: Q8C7B8

Zswim4, Zinc finger SWIM domain-containing protein 4, mousemouse

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim4Q8C7B8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Zswim4Q8C7B8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.52■■■■□ 3.28
Zswim4Q8C7B8 Gm25239-201ENSMUST00000174915 86 ntBASIC35.51■■■■□ 3.28
Zswim4Q8C7B8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Zswim4Q8C7B8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Zswim4Q8C7B8 Psd-208ENSMUST00000224556 2034 ntBASIC34.68■■■■□ 3.14
Zswim4Q8C7B8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Zswim4Q8C7B8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Zswim4Q8C7B8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Zswim4Q8C7B8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Zswim4Q8C7B8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Zswim4Q8C7B8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Zswim4Q8C7B8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Zswim4Q8C7B8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
Zswim4Q8C7B8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Zswim4Q8C7B8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Zswim4Q8C7B8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.43■■■□□ 2.78
Zswim4Q8C7B8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
Zswim4Q8C7B8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Zswim4Q8C7B8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Zswim4Q8C7B8 Gm15042-201ENSMUST00000120212 883 ntBASIC32.12■■■□□ 2.73
Zswim4Q8C7B8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32■■■□□ 2.71
Zswim4Q8C7B8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Zswim4Q8C7B8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Zswim4Q8C7B8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Zswim4Q8C7B8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Zswim4Q8C7B8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Zswim4Q8C7B8 Gm15045-201ENSMUST00000117359 883 ntBASIC31.63■■■□□ 2.65
Zswim4Q8C7B8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Zswim4Q8C7B8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.52■■■□□ 2.64
Zswim4Q8C7B8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Zswim4Q8C7B8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.41■■■□□ 2.62
Zswim4Q8C7B8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Zswim4Q8C7B8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Zswim4Q8C7B8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Zswim4Q8C7B8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.29■■■□□ 2.6
Zswim4Q8C7B8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.25■■■□□ 2.59
Zswim4Q8C7B8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Zswim4Q8C7B8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Zswim4Q8C7B8 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.1■■■□□ 2.57
Zswim4Q8C7B8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Zswim4Q8C7B8 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.07■■■□□ 2.56
Zswim4Q8C7B8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Zswim4Q8C7B8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Zswim4Q8C7B8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Zswim4Q8C7B8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Zswim4Q8C7B8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Zswim4Q8C7B8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Zswim4Q8C7B8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Zswim4Q8C7B8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Zswim4Q8C7B8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Zswim4Q8C7B8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
Zswim4Q8C7B8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.64■■■□□ 2.5
Zswim4Q8C7B8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Zswim4Q8C7B8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.41■■■□□ 2.46
Zswim4Q8C7B8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Zswim4Q8C7B8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Zswim4Q8C7B8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Zswim4Q8C7B8 Gm24109-201ENSMUST00000175489 103 ntBASIC30.27■■■□□ 2.44
Zswim4Q8C7B8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Zswim4Q8C7B8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Zswim4Q8C7B8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.11■■■□□ 2.41
Zswim4Q8C7B8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Zswim4Q8C7B8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Zswim4Q8C7B8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Zswim4Q8C7B8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Zswim4Q8C7B8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Zswim4Q8C7B8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
Zswim4Q8C7B8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Zswim4Q8C7B8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Zswim4Q8C7B8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Zswim4Q8C7B8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Zswim4Q8C7B8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Zswim4Q8C7B8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Zswim4Q8C7B8 Gm23366-201ENSMUST00000175022 89 ntBASIC29.76■■■□□ 2.35
Zswim4Q8C7B8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Zswim4Q8C7B8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Zswim4Q8C7B8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Zswim4Q8C7B8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
Zswim4Q8C7B8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Zswim4Q8C7B8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Zswim4Q8C7B8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.6■■■□□ 2.33
Zswim4Q8C7B8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Zswim4Q8C7B8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Zswim4Q8C7B8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
Zswim4Q8C7B8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Zswim4Q8C7B8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
Zswim4Q8C7B8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.43■■■□□ 2.3
Zswim4Q8C7B8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
Zswim4Q8C7B8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.37■■■□□ 2.29
Zswim4Q8C7B8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Zswim4Q8C7B8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Zswim4Q8C7B8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.28■■■□□ 2.28
Zswim4Q8C7B8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Zswim4Q8C7B8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Zswim4Q8C7B8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Zswim4Q8C7B8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Zswim4Q8C7B8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Zswim4Q8C7B8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Zswim4Q8C7B8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.16■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms