Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Gm25239-201ENSMUST00000174915 86 ntBASIC44.26■■■■■ 4.68
Usp50Q6P8X6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.87■■■■■ 4.13
Usp50Q6P8X6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
Usp50Q6P8X6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
Usp50Q6P8X6 Gm15042-201ENSMUST00000120212 883 ntBASIC38.84■■■■□ 3.81
Usp50Q6P8X6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Usp50Q6P8X6 Gm24109-201ENSMUST00000175489 103 ntBASIC38.32■■■■□ 3.72
Usp50Q6P8X6 Gm15045-201ENSMUST00000117359 883 ntBASIC38.08■■■■□ 3.69
Usp50Q6P8X6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.91■■■■□ 3.66
Usp50Q6P8X6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Usp50Q6P8X6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.32■■■■□ 3.56
Usp50Q6P8X6 Gm23366-201ENSMUST00000175022 89 ntBASIC36.92■■■■□ 3.5
Usp50Q6P8X6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
Usp50Q6P8X6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Usp50Q6P8X6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Usp50Q6P8X6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.48■■■■□ 3.43
Usp50Q6P8X6 Psd-208ENSMUST00000224556 2034 ntBASIC36.27■■■■□ 3.4
Usp50Q6P8X6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Usp50Q6P8X6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.17■■■■□ 3.38
Usp50Q6P8X6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Usp50Q6P8X6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.03■■■■□ 3.36
Usp50Q6P8X6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
Usp50Q6P8X6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.94■■■■□ 3.34
Usp50Q6P8X6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.85■■■■□ 3.33
Usp50Q6P8X6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.77■■■■□ 3.32
Usp50Q6P8X6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Usp50Q6P8X6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.66■■■■□ 3.3
Usp50Q6P8X6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.62■■■■□ 3.29
Usp50Q6P8X6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
Usp50Q6P8X6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.51■■■■□ 3.28
Usp50Q6P8X6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.17■■■■□ 3.22
Usp50Q6P8X6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Usp50Q6P8X6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Usp50Q6P8X6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Usp50Q6P8X6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.02■■■■□ 3.2
Usp50Q6P8X6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Usp50Q6P8X6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Usp50Q6P8X6 Gm25238-201ENSMUST00000174914 89 ntBASIC34.92■■■■□ 3.18
Usp50Q6P8X6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Usp50Q6P8X6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Usp50Q6P8X6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.72■■■■□ 3.15
Usp50Q6P8X6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Usp50Q6P8X6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Usp50Q6P8X6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Usp50Q6P8X6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.32■■■■□ 3.08
Usp50Q6P8X6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Usp50Q6P8X6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Usp50Q6P8X6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Usp50Q6P8X6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.22■■■■□ 3.07
Usp50Q6P8X6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Usp50Q6P8X6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.12■■■■□ 3.05
Usp50Q6P8X6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.1■■■■□ 3.05
Usp50Q6P8X6 Gm27325-201ENSMUST00000175467 74 ntBASIC34.09■■■■□ 3.05
Usp50Q6P8X6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Usp50Q6P8X6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Usp50Q6P8X6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Usp50Q6P8X6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
Usp50Q6P8X6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
Usp50Q6P8X6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.75■■■□□ 2.99
Usp50Q6P8X6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.71■■■□□ 2.99
Usp50Q6P8X6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Usp50Q6P8X6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.64■■■□□ 2.98
Usp50Q6P8X6 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.61■■■□□ 2.97
Usp50Q6P8X6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.6■■■□□ 2.97
Usp50Q6P8X6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.57■■■□□ 2.97
Usp50Q6P8X6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Usp50Q6P8X6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Usp50Q6P8X6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Usp50Q6P8X6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Usp50Q6P8X6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Usp50Q6P8X6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Usp50Q6P8X6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
Usp50Q6P8X6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Usp50Q6P8X6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.32■■■□□ 2.92
Usp50Q6P8X6 Rab21-202ENSMUST00000218831 843 ntBASIC33.29■■■□□ 2.92
Usp50Q6P8X6 Gm25262-201ENSMUST00000174934 133 ntBASIC33.23■■■□□ 2.91
Usp50Q6P8X6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.23■■■□□ 2.91
Usp50Q6P8X6 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.23■■■□□ 2.91
Usp50Q6P8X6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Usp50Q6P8X6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.19■■■□□ 2.9
Usp50Q6P8X6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.15■■■□□ 2.9
Usp50Q6P8X6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Usp50Q6P8X6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Usp50Q6P8X6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Usp50Q6P8X6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
Usp50Q6P8X6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33■■■□□ 2.87
Usp50Q6P8X6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Usp50Q6P8X6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Usp50Q6P8X6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Usp50Q6P8X6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Usp50Q6P8X6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.83■■■□□ 2.85
Usp50Q6P8X6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
Usp50Q6P8X6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Usp50Q6P8X6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Usp50Q6P8X6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
Usp50Q6P8X6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Usp50Q6P8X6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Usp50Q6P8X6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.61■■■□□ 2.81
Usp50Q6P8X6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.56■■■□□ 2.8
Usp50Q6P8X6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms