RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C NIP1P32497 812 aaKnown RBP8.4□□□□□ -1.07
SRP54YPR088C TYE7P33122 291 aaPredicted RBP8.4□□□□□ -1.07
SRP54YPR088C COY1P34237 679 aa8.4□□□□□ -1.07
SRP54YPR088C MEF2P39677 819 aa8.4□□□□□ -1.07
SRP54YPR088C SLX8P40072 274 aa8.4□□□□□ -1.07
SRP54YPR088C RGI2P40188 164 aa8.4□□□□□ -1.07
SRP54YPR088C PET117Q02771 107 aa8.4□□□□□ -1.07
SRP54YPR088C TFB2Q02939 513 aa8.4□□□□□ -1.07
SRP54YPR088C YLR177WQ06251 628 aa8.4□□□□□ -1.07
SRP54YPR088C SYT1Q06836 1226 aa8.4□□□□□ -1.07
SRP54YPR088C ADY3Q07732 790 aa8.4□□□□□ -1.07
SRP54YPR088C NOB1Q08444 459 aaKnown RBP8.4□□□□□ -1.07
SRP54YPR088C SIR1P21691 654 aa8.39□□□□□ -1.07
SRP54YPR088C DCC1P25559 380 aa8.39□□□□□ -1.07
SRP54YPR088C GEX1P25596 615 aa8.39□□□□□ -1.07
SRP54YPR088C AEP1P32493 518 aa8.39□□□□□ -1.07
SRP54YPR088C GEX2P36173 615 aa8.39□□□□□ -1.07
SRP54YPR088C MAK5P38112 773 aaPredicted RBP8.39□□□□□ -1.07
SRP54YPR088C HSM3P38348 480 aa8.39□□□□□ -1.07
SRP54YPR088C MNN1P39106 762 aa8.39□□□□□ -1.07
SRP54YPR088C ARH1P48360 493 aa8.39□□□□□ -1.07
SRP54YPR088C SAP4P53036 818 aa8.39□□□□□ -1.07
SRP54YPR088C AIM14P53109 570 aa8.39□□□□□ -1.07
SRP54YPR088C ADE12P80210 433 aaKnown RBP8.39□□□□□ -1.07
SRP54YPR088C RPN9Q04062 393 aaKnown RBP8.39□□□□□ -1.07
SRP54YPR088C SGO1Q08490 590 aa8.39□□□□□ -1.07
SRP54YPR088C YMR030W-AQ3E760 96 aa8.39□□□□□ -1.07
SRP54YPR088C YMR085WP0CF18 432 aa8.38□□□□□ -1.07
SRP54YPR088C RAM1P22007 431 aa8.38□□□□□ -1.07
SRP54YPR088C RBK1P25332 333 aa8.38□□□□□ -1.07
SRP54YPR088C HEM3P28789 327 aa8.38□□□□□ -1.07
SRP54YPR088C BEM1P29366 551 aa8.38□□□□□ -1.07
SRP54YPR088C PHA2P32452 334 aa8.38□□□□□ -1.07
SRP54YPR088C GCD11P32481 527 aaKnown RBP8.38□□□□□ -1.07
SRP54YPR088C MRE11P32829 692 aa8.38□□□□□ -1.07
SRP54YPR088C LIP5P32875 414 aa8.38□□□□□ -1.07
SRP54YPR088C IMP3P32899 183 aaPredicted RBP8.38□□□□□ -1.07
SRP54YPR088C CTF13P35203 478 aa8.38□□□□□ -1.07
SRP54YPR088C RIM2P38127 377 aa8.38□□□□□ -1.07
SRP54YPR088C HOS4P40480 1083 aa8.38□□□□□ -1.07
SRP54YPR088C FAR3P46671 204 aa8.38□□□□□ -1.07
SRP54YPR088C SIP4P46954 829 aa8.38□□□□□ -1.07
SRP54YPR088C ORC3P54790 616 aa8.38□□□□□ -1.07
SRP54YPR088C VPS16Q03308 798 aa8.38□□□□□ -1.07
SRP54YPR088C PML39Q03760 334 aa8.38□□□□□ -1.07
SRP54YPR088C TMN2Q04562 672 aa8.38□□□□□ -1.07
SRP54YPR088C GSF2Q04697 403 aaKnown RBP8.38□□□□□ -1.07
SRP54YPR088C PDH1Q12428 516 aaKnown RBP8.38□□□□□ -1.07
SRP54YPR088C RMD5Q12508 421 aa8.38□□□□□ -1.07
SRP54YPR088C KIN3P22209 435 aa8.37□□□□□ -1.07
SRP54YPR088C EMC1P25574 760 aa8.37□□□□□ -1.07
SRP54YPR088C TOM20P35180 183 aa8.37□□□□□ -1.07
SRP54YPR088C ALY1P36117 915 aa8.37□□□□□ -1.07
SRP54YPR088C HEK2P38199 381 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
SRP54YPR088C PHO89P38361 574 aa8.37□□□□□ -1.07
SRP54YPR088C YHR182WP38870 785 aa8.37□□□□□ -1.07
SRP54YPR088C DUN1P39009 513 aa8.37□□□□□ -1.07
SRP54YPR088C AIM23P47015 356 aa8.37□□□□□ -1.07
SRP54YPR088C IST1P53843 298 aaPredicted RBP8.37□□□□□ -1.07
SRP54YPR088C SUB1P54000 292 aaKnown RBP8.37□□□□□ -1.07
SRP54YPR088C PIR1Q03178 341 aa8.37□□□□□ -1.07
SRP54YPR088C CLP1Q08685 445 aaPredicted RBP8.37□□□□□ -1.07
SRP54YPR088C YLR149CQ99296 730 aa8.37□□□□□ -1.07
SRP54YPR088C GLN4P13188 809 aaKnown RBP8.36□□□□□ -1.07
SRP54YPR088C NSP1P14907 823 aaKnown RBP8.36□□□□□ -1.07
SRP54YPR088C PRP16P15938 1071 aaPredicted RBP8.36□□□□□ -1.07
SRP54YPR088C BAS1P22035 811 aa8.36□□□□□ -1.07
SRP54YPR088C CLB1P24868 471 aa8.36□□□□□ -1.07
SRP54YPR088C YJR061WP40355 935 aa8.36□□□□□ -1.07
SRP54YPR088C ARC1P46672 376 aaKnown RBP8.36□□□□□ -1.07
SRP54YPR088C COG1P53079 417 aa8.36□□□□□ -1.07
SRP54YPR088C DMA2P53924 522 aa8.36□□□□□ -1.07
SRP54YPR088C YMR102CQ03177 834 aa8.36□□□□□ -1.07
SRP54YPR088C YDR132CQ03900 495 aa8.36□□□□□ -1.07
SRP54YPR088C MCP2Q06567 569 aa8.36□□□□□ -1.07
SRP54YPR088C YDR034W-BQ6Q5X2 51 aa8.36□□□□□ -1.07
SRP54YPR088C MNE1P24720 663 aa8.36□□□□□ -1.07
SRP54YPR088C RPC19P28000 142 aaKnown RBP8.36□□□□□ -1.07
SRP54YPR088C HAT2P39984 401 aa8.36□□□□□ -1.07
SRP54YPR088C DOT6P40059 670 aaKnown RBP8.36□□□□□ -1.07
SRP54YPR088C PAN6P40459 309 aa8.36□□□□□ -1.07
SRP54YPR088C ERG10P41338 398 aaKnown RBP8.36□□□□□ -1.07
SRP54YPR088C PRM1P53835 661 aa8.36□□□□□ -1.07
SRP54YPR088C RNY1Q02933 434 aaKnown RBP8.36□□□□□ -1.07
SRP54YPR088C YPR114WQ06107 315 aa8.36□□□□□ -1.07
SRP54YPR088C FLC1Q08967 793 aa8.36□□□□□ -1.07
SRP54YPR088C CHS5Q12114 671 aaKnown RBP8.36□□□□□ -1.07
SRP54YPR088C NOT5Q12514 560 aaPredicted RBP8.36□□□□□ -1.07
SRP54YPR088C YPT6Q99260 215 aa8.36□□□□□ -1.07
SRP54YPR088C STE2D6VTK4 431 aa8.35□□□□□ -1.07
SRP54YPR088C GUT2P32191 649 aa8.35□□□□□ -1.07
SRP54YPR088C YSC84P32793 468 aa8.35□□□□□ -1.07
SRP54YPR088C SCD5P34758 872 aa8.35□□□□□ -1.07
SRP54YPR088C CHS6P40955 746 aa8.35□□□□□ -1.07
SRP54YPR088C TES1P41903 349 aaKnown RBP8.35□□□□□ -1.07
SRP54YPR088C CSN12P47130 423 aa8.35□□□□□ -1.07
SRP54YPR088C HPT1Q04178 221 aaKnown RBP8.35□□□□□ -1.07
SRP54YPR088C AMD1P15274 810 aaKnown RBP8.34□□□□□ -1.07
SRP54YPR088C PMA2P19657 947 aa8.34□□□□□ -1.07
SRP54YPR088C TRX2P22803 104 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms