RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W PHO89P38361 574 aa5.55□□□□□ -1.52
PDH1YPR002W YJL206CP39529 758 aa5.55□□□□□ -1.52
PDH1YPR002W YIL054WP40524 105 aa5.55□□□□□ -1.52
PDH1YPR002W SNL1P40548 159 aa5.55□□□□□ -1.52
PDH1YPR002W LAM5P43560 674 aa5.55□□□□□ -1.52
PDH1YPR002W NOP9P47077 666 aaKnown RBP5.55□□□□□ -1.52
PDH1YPR002W YGR117CP53270 476 aa5.55□□□□□ -1.52
PDH1YPR002W COG2P53271 262 aa5.55□□□□□ -1.52
PDH1YPR002W DCP2P53550 970 aaKnown RBP5.55□□□□□ -1.52
PDH1YPR002W ASI2P53895 289 aa5.55□□□□□ -1.52
PDH1YPR002W YMR160WQ03823 816 aa5.55□□□□□ -1.52
PDH1YPR002W YET2Q04210 160 aa5.55□□□□□ -1.52
PDH1YPR002W AIM39Q08223 395 aa5.55□□□□□ -1.52
PDH1YPR002W OSW2Q12202 724 aa5.55□□□□□ -1.52
PDH1YPR002W PCD1Q12524 340 aa5.55□□□□□ -1.52
PDH1YPR002W CSR2Q12734 1121 aa5.55□□□□□ -1.52
PDH1YPR002W STE2D6VTK4 431 aa5.55□□□□□ -1.52
PDH1YPR002W GAL10P04397 699 aa5.55□□□□□ -1.52
PDH1YPR002W RPS9BP05755 195 aaKnown RBP5.55□□□□□ -1.52
PDH1YPR002W CBP1P07252 654 aa5.55□□□□□ -1.52
PDH1YPR002W GCY1P14065 312 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
PDH1YPR002W MSM1P22438 575 aa5.55□□□□□ -1.52
PDH1YPR002W TKL1P23254 680 aaKnown RBP5.55□□□□□ -1.52
PDH1YPR002W PRE9P23638 258 aaKnown RBP5.55□□□□□ -1.52
PDH1YPR002W PER1P25625 357 aa5.55□□□□□ -1.52
PDH1YPR002W HXT3P32466 567 aaKnown RBP5.55□□□□□ -1.52
PDH1YPR002W UTR4P32626 227 aa5.55□□□□□ -1.52
PDH1YPR002W RRN3P36070 627 aa5.55□□□□□ -1.52
PDH1YPR002W GPB2P39717 880 aa5.55□□□□□ -1.52
PDH1YPR002W YEL025CP39991 1188 aa5.55□□□□□ -1.52
PDH1YPR002W EAF5P39995 279 aa5.55□□□□□ -1.52
PDH1YPR002W CAB2P40506 365 aa5.55□□□□□ -1.52
PDH1YPR002W MND2P40577 368 aa5.55□□□□□ -1.52
PDH1YPR002W FET4P40988 552 aa5.55□□□□□ -1.52
PDH1YPR002W FMP32P43557 207 aa5.55□□□□□ -1.52
PDH1YPR002W BNA3P47039 444 aaKnown RBP5.55□□□□□ -1.52
PDH1YPR002W MNP1P53163 194 aaPredicted RBP5.55□□□□□ -1.52
PDH1YPR002W YNR065CP53751 1116 aa5.55□□□□□ -1.52
PDH1YPR002W ASI1P54074 624 aa5.55□□□□□ -1.52
PDH1YPR002W JIP5Q06214 492 aaPredicted RBP5.55□□□□□ -1.52
PDH1YPR002W ENT4Q07872 247 aa5.55□□□□□ -1.52
PDH1YPR002W CIR2Q08822 631 aa5.55□□□□□ -1.52
PDH1YPR002W VIK1Q12045 647 aa5.55□□□□□ -1.52
PDH1YPR002W MSH5Q12175 901 aa5.55□□□□□ -1.52
PDH1YPR002W YLL056CQ12177 298 aa5.55□□□□□ -1.52
PDH1YPR002W EMP46Q12396 444 aa5.55□□□□□ -1.52
PDH1YPR002W ERP3Q12403 225 aa5.55□□□□□ -1.52
PDH1YPR002W ATG11Q12527 1178 aa5.55□□□□□ -1.52
PDH1YPR002W ERR1P0CX10 437 aa5.54□□□□□ -1.52
PDH1YPR002W ERR2P0CX11 437 aa5.54□□□□□ -1.52
PDH1YPR002W ASP3-2P0CX77 362 aa5.54□□□□□ -1.52
PDH1YPR002W ASP3-3P0CX78 362 aa5.54□□□□□ -1.52
PDH1YPR002W ASP3-4P0CX79 362 aa5.54□□□□□ -1.52
PDH1YPR002W ASP3-1P0CZ17 362 aa5.54□□□□□ -1.52
PDH1YPR002W SEC63P14906 663 aa5.54□□□□□ -1.52
PDH1YPR002W HPR1P17629 752 aaKnown RBP5.54□□□□□ -1.52
PDH1YPR002W DPB2P24482 689 aaPredicted RBP5.54□□□□□ -1.52
PDH1YPR002W GID7P25569 745 aa5.54□□□□□ -1.52
PDH1YPR002W URA10P30402 227 aa5.54□□□□□ -1.52
PDH1YPR002W KES1P35844 434 aaKnown RBP5.54□□□□□ -1.52
PDH1YPR002W ABZ1P37254 787 aaPredicted RBP5.54□□□□□ -1.52
PDH1YPR002W KAP104P38217 918 aaKnown RBP5.54□□□□□ -1.52
PDH1YPR002W MMS4P38257 691 aa5.54□□□□□ -1.52
PDH1YPR002W VID24P38263 362 aa5.54□□□□□ -1.52
PDH1YPR002W NPT1P39683 429 aaKnown RBP5.54□□□□□ -1.52
PDH1YPR002W SIT1P39980 628 aa5.54□□□□□ -1.52
PDH1YPR002W ERR3P42222 437 aa5.54□□□□□ -1.52
PDH1YPR002W LEM3P42838 414 aa5.54□□□□□ -1.52
PDH1YPR002W LSB6P42951 607 aa5.54□□□□□ -1.52
PDH1YPR002W SCD6P45978 349 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
PDH1YPR002W VMA10P48836 114 aaKnown RBP5.54□□□□□ -1.52
PDH1YPR002W MND1P53102 219 aa5.54□□□□□ -1.52
PDH1YPR002W BUD32P53323 261 aa5.54□□□□□ -1.52
PDH1YPR002W ELP3Q02908 557 aaKnown RBP5.54□□□□□ -1.52
PDH1YPR002W RAD30Q04049 632 aa5.54□□□□□ -1.52
PDH1YPR002W FMP42Q04991 504 aa5.54□□□□□ -1.52
PDH1YPR002W DIS3Q08162 1001 aaKnown RBP5.54□□□□□ -1.52
PDH1YPR002W APC9Q12107 265 aa5.54□□□□□ -1.52
PDH1YPR002W RGS2Q99188 309 aa5.54□□□□□ -1.52
PDH1YPR002W IZH4Q99393 312 aa5.54□□□□□ -1.52
PDH1YPR002W YLR278CQ05854 1341 aa5.53□□□□□ -1.52
PDH1YPR002W PAB1P04147 577 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
PDH1YPR002W RPL4AP10664 362 aaKnown RBP5.53□□□□□ -1.52
PDH1YPR002W VPS34P22543 875 aa5.53□□□□□ -1.52
PDH1YPR002W CCR4P31384 837 aaKnown RBP5.53□□□□□ -1.52
PDH1YPR002W PHA2P32452 334 aa5.53□□□□□ -1.52
PDH1YPR002W ATO2P32907 282 aa5.53□□□□□ -1.52
PDH1YPR002W TIF3P34167 436 aaKnown RBP5.53□□□□□ -1.52
PDH1YPR002W RRP14P36080 434 aaKnown RBP5.53□□□□□ -1.52
PDH1YPR002W DBP7P36120 742 aaKnown RBP5.53□□□□□ -1.52
PDH1YPR002W RDH54P38086 958 aa5.53□□□□□ -1.52
PDH1YPR002W REG2P38232 338 aa5.53□□□□□ -1.52
PDH1YPR002W ALG14P38242 237 aa5.53□□□□□ -1.52
PDH1YPR002W ATG12P38316 186 aa5.53□□□□□ -1.52
PDH1YPR002W UTP9P38882 575 aaKnown RBP5.53□□□□□ -1.52
PDH1YPR002W SHU2P38957 223 aa5.53□□□□□ -1.52
PDH1YPR002W NEO1P40527 1151 aa5.53□□□□□ -1.52
PDH1YPR002W SET2P46995 733 aaKnown RBP5.53□□□□□ -1.52
PDH1YPR002W RBL2P48606 106 aaKnown RBP5.53□□□□□ -1.52
PDH1YPR002W RPL4BP49626 362 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms