RNA–Protein interactions for RNA: YJR143C

PMT4, Transcript of Protein O-mannosyltransferase, yeast

Gene PMT4, Length 2,289 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMT4	YJR143C	RFC3	P38629	340 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	PEX18	P38855	283 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	ALK1	P43633	760 aa	Known RBP	4.6	□□□□□ -1.67
PMT4	YJR143C	BPL1	P48445	690 aa	Predicted RBP	4.6	□□□□□ -1.67
PMT4	YJR143C	YGR130C	P53278	816 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	SQS1	P53866	767 aa	Known RBP	4.6	□□□□□ -1.67
PMT4	YJR143C	ATG21	Q02887	496 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	UFO1	Q04511	668 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	AIM6	Q07716	390 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	YEH1	Q07804	573 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	SEC39	Q12745	709 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	ADF1	Q2V2Q1	113 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	PUT4	P15380	627 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	PRE4	P30657	266 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	AUR1	P36107	401 aa	Predicted RBP	4.6	□□□□□ -1.67
PMT4	YJR143C	NTC20	P38302	140 aa	Predicted RBP	4.6	□□□□□ -1.67
PMT4	YJR143C	RRT2	P38332	387 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	ALD5	P40047	520 aa	Known RBP	4.6	□□□□□ -1.67
PMT4	YJR143C	LEM3	P42838	414 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	TAH11	P47112	604 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	MLC1	P53141	149 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	YGR111W	P53265	400 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	ARP5	P53946	755 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	MAK10	Q02197	733 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	TRS31	Q03337	283 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	TCO89	Q08921	799 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	YJR112W-A	Q3E743	109 aa		4.6	□□□□□ -1.67
PMT4	YJR143C	ATP2	P00830	511 aa	Known RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	GAL7	P08431	366 aa		4.59	□□□□□ -1.67
PMT4	YJR143C	GCD1	P09032	578 aa	Predicted RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	CAD1	P24813	409 aa	Known RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	ERG6	P25087	383 aa	Known RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	RPS7A	P26786	190 aa	Known RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	PAP1	P29468	568 aa	Known RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	HMX1	P32339	317 aa		4.59	□□□□□ -1.67
PMT4	YJR143C	SMY1	P32364	656 aa	Known RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	YME1	P32795	747 aa		4.59	□□□□□ -1.67
PMT4	YJR143C	LTV1	P34078	463 aa		4.59	□□□□□ -1.67
PMT4	YJR143C	APN2	P38207	520 aa		4.59	□□□□□ -1.67
PMT4	YJR143C	COS111	P38308	924 aa		4.59	□□□□□ -1.67
PMT4	YJR143C	SLZ1	P40167	298 aa		4.59	□□□□□ -1.67
PMT4	YJR143C	INA22	P40576	216 aa		4.59	□□□□□ -1.67
PMT4	YJR143C	LSC1	P53598	329 aa	Known RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	RHO5	P53879	331 aa	Known RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	RBS1	Q05672	457 aa	Known RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	PFK27	Q12471	397 aa	Predicted RBP	4.59	□□□□□ -1.67
PMT4	YJR143C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
PMT4	YJR143C	FBP1	P09201	348 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	LPD1	P09624	499 aa	Known RBP	4.58	□□□□□ -1.68
PMT4	YJR143C	PET122	P10355	254 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	HMG2	P12684	1045 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	FRS1	P15624	595 aa	Known RBP	4.58	□□□□□ -1.68
PMT4	YJR143C	DPH5	P32469	300 aa	Predicted RBP	4.58	□□□□□ -1.68
PMT4	YJR143C	PET127	P32606	800 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	GPT2	P36148	743 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	STB5	P38699	743 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	RRM3	P38766	723 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	YIL089W	P40500	205 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	ZAP1	P47043	880 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	DSE4	P53753	1117 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	YNL050C	P53952	270 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	REX2	P54964	269 aa	Known RBP	4.58	□□□□□ -1.68
PMT4	YJR143C	SDH1	Q00711	640 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	INP2	Q03824	705 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	VPS36	Q06696	566 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	TPK2	P06245	380 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	SYN8	P31377	255 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	RPC82	P32349	654 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	DOA4	P32571	926 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	MAL33	P38157	468 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	ETP1	P38748	585 aa	Known RBP	4.58	□□□□□ -1.68
PMT4	YJR143C	REV7	P38927	245 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	AIM10	P39965	576 aa	Known RBP	4.58	□□□□□ -1.68
PMT4	YJR143C	EFM3	P47163	339 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	MDR1	P53258	950 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	RQC1	Q05468	723 aa	Known RBP	4.58	□□□□□ -1.68
PMT4	YJR143C	DIB1	Q06819	143 aa	Predicted RBP	4.58	□□□□□ -1.68
PMT4	YJR143C	MDM36	Q06820	579 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	ATG29	Q12092	213 aa		4.58	□□□□□ -1.68
PMT4	YJR143C	CAR2	P07991	424 aa	Known RBP	4.57	□□□□□ -1.68
PMT4	YJR143C	RPB4	P20433	221 aa	Predicted RBP	4.57	□□□□□ -1.68
PMT4	YJR143C	PRE8	P23639	250 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	BUD14	P27637	709 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	AFG1	P32317	509 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	MRE11	P32829	692 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	PMT1	P33775	817 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	TDP1	P38319	544 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	YHL017W	P38745	532 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	SER3	P40054	469 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	RAI1	P53063	387 aa	Known RBP	4.57	□□□□□ -1.68
PMT4	YJR143C	YGL242C	P53066	181 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	YGL036W	P53185	909 aa	Predicted RBP	4.57	□□□□□ -1.68
PMT4	YJR143C	TNA1	P53322	534 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	PPN1	Q04119	674 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	VPS20	Q04272	221 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	DCI1	Q08558	271 aa		4.57	□□□□□ -1.68
PMT4	YJR143C	TDH1	P00360	332 aa	Known RBP	4.57	□□□□□ -1.68
PMT4	YJR143C	PRP45	P28004	379 aa	Predicted RBP	4.57	□□□□□ -1.68
PMT4	YJR143C	PRE2	P30656	287 aa	Known RBP	4.57	□□□□□ -1.68
PMT4	YJR143C	ASF2	P32448	525 aa	Predicted RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms