RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	HST1	P53685	503 aa		5.63	□□□□□ -1.51
RSC30	YHR056C	ELP4	Q02884	456 aa	Known RBP	5.63	□□□□□ -1.51
RSC30	YHR056C	YDR444W	Q04093	687 aa		5.63	□□□□□ -1.51
RSC30	YHR056C	UBR1	P19812	1950 aa		5.63	□□□□□ -1.51
RSC30	YHR056C	CDC37	P06101	506 aa	Known RBP	5.62	□□□□□ -1.51
RSC30	YHR056C	NIP100	P33420	868 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	NTR2	P36118	322 aa	Predicted RBP	5.62	□□□□□ -1.51
RSC30	YHR056C	BIT2	P38346	545 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	IKS1	P47042	667 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	RFX1	P48743	811 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	YGR012W	P53206	393 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	ZRG17	P53735	605 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	RSC4	Q02206	625 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	YPR148C	Q06523	435 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	TPO1	Q07824	586 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	BUD7	Q08754	746 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	SCD5	P34758	872 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	ELO3	P40319	345 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	CCT5	P40413	562 aa	Known RBP	5.62	□□□□□ -1.51
RSC30	YHR056C	MVP1	P40959	511 aa	Known RBP	5.62	□□□□□ -1.51
RSC30	YHR056C	CTK3	P46963	296 aa	Predicted RBP	5.62	□□□□□ -1.51
RSC30	YHR056C	YDR222W	Q04925	415 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	YDR338C	Q05497	695 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	AAD15	Q08361	143 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	DIN7	Q12086	430 aa		5.62	□□□□□ -1.51
RSC30	YHR056C	AI4	P03878	556 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	MST1	P07236	462 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	CPA1	P07258	411 aa	Known RBP	5.61	□□□□□ -1.51
RSC30	YHR056C	LYP1	P32487	611 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	GMH1	P36125	273 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	LRO1	P40345	661 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	ROK1	P45818	564 aa	Predicted RBP	5.61	□□□□□ -1.51
RSC30	YHR056C	YNL092W	P53934	400 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
RSC30	YHR056C	RPL7A	P05737	244 aa	Known RBP	5.61	□□□□□ -1.51
RSC30	YHR056C	SEF1	P34228	1148 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	ASN2	P49090	572 aa	Known RBP	5.61	□□□□□ -1.51
RSC30	YHR056C	YGR250C	P53316	781 aa	Known RBP	5.61	□□□□□ -1.51
RSC30	YHR056C	EMI1	Q04406	187 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	ENT2	Q05785	613 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	AFT2	Q08957	416 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	TRM8	Q12009	286 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	RPL7B	Q12213	244 aa	Known RBP	5.61	□□□□□ -1.51
RSC30	YHR056C	HSH49	Q99181	213 aa	Predicted RBP	5.61	□□□□□ -1.51
RSC30	YHR056C	RPL17A	P05740	184 aa	Known RBP	5.61	□□□□□ -1.51
RSC30	YHR056C	CTF13	P35203	478 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	MGS1	P40151	587 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	RPL17B	P46990	184 aa	Known RBP	5.61	□□□□□ -1.51
RSC30	YHR056C	BLS1	Q06071	122 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	GRS2	Q06817	618 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	LAG2	Q92325	660 aa		5.61	□□□□□ -1.51
RSC30	YHR056C	IMG1	P25626	169 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	SIN4	P32259	974 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	DOM34	P33309	386 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	SKN1	P33336	771 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	DSS1	P39112	969 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	YIR014W	P40570	242 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	YGL260W	P53056	76 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	CDC14	Q00684	551 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	OCA6	Q12454	224 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	URA4	P20051	364 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	TRX1	P22217	103 aa	Known RBP	5.6	□□□□□ -1.51
RSC30	YHR056C	YSR3	P23501	404 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	YCR006C	P25350	157 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	BUD14	P27637	709 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	AEP1	P32493	518 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	MND2	P40577	368 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	RRT5	P43607	289 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	RIM21	P48565	533 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	COG1	P53079	417 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	PRO2	P54885	456 aa	Known RBP	5.6	□□□□□ -1.51
RSC30	YHR056C	SRP1	Q02821	542 aa	Known RBP	5.6	□□□□□ -1.51
RSC30	YHR056C	ADY3	Q07732	790 aa		5.6	□□□□□ -1.51
RSC30	YHR056C	YOR097C	Q12274	175 aa	Predicted RBP	5.6	□□□□□ -1.51
RSC30	YHR056C	PRP2	P20095	876 aa	Predicted RBP	5.59	□□□□□ -1.51
RSC30	YHR056C	ADH7	P25377	361 aa		5.59	□□□□□ -1.51
RSC30	YHR056C	HFA1	P32874	2273 aa		5.59	□□□□□ -1.51
RSC30	YHR056C	TFA2	P36145	328 aa		5.59	□□□□□ -1.51
RSC30	YHR056C	DED81	P38707	554 aa	Known RBP	5.59	□□□□□ -1.51
RSC30	YHR056C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	RIP-Chip
RSC30	YHR056C	YER130C	P39959	443 aa		5.59	□□□□□ -1.51
RSC30	YHR056C	MAD1	P40957	749 aa		5.59	□□□□□ -1.51
RSC30	YHR056C	ALK1	P43633	760 aa	Known RBP	5.59	□□□□□ -1.51
RSC30	YHR056C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
RSC30	YHR056C	EFM6	P53970	246 aa		5.59	□□□□□ -1.51
RSC30	YHR056C	YOR059C	Q08448	450 aa	Known RBP	5.59	□□□□□ -1.51
RSC30	YHR056C	AIM44	Q99299	758 aa		5.59	□□□□□ -1.51
RSC30	YHR056C	BCY1	P07278	416 aa	Known RBP	5.59	□□□□□ -1.52
RSC30	YHR056C	GPA1	P08539	472 aa		5.59	□□□□□ -1.52
RSC30	YHR056C	FUR1	P18562	216 aa	Known RBP	5.59	□□□□□ -1.52
RSC30	YHR056C	PET309	P32522	965 aa	Predicted RBP	5.59	□□□□□ -1.52
RSC30	YHR056C	RAD5	P32849	1169 aa	Predicted RBP	5.59	□□□□□ -1.52
RSC30	YHR056C	STB6	P36085	766 aa		5.59	□□□□□ -1.52
RSC30	YHR056C	IRS4	P36115	615 aa	Known RBP	5.59	□□□□□ -1.52
RSC30	YHR056C	CTP1	P38152	299 aa		5.59	□□□□□ -1.52
RSC30	YHR056C	TMN3	P40071	706 aa		5.59	□□□□□ -1.52
RSC30	YHR056C	ELP3	Q02908	557 aa	Known RBP	5.59	□□□□□ -1.52
RSC30	YHR056C	SMF3	Q12078	473 aa	Predicted RBP	5.59	□□□□□ -1.52
RSC30	YHR056C	MPH2	P0CD99	609 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	KAR1	P11927	433 aa		5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms