RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	RIM2	P38127	377 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	ECM10	P39987	644 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	MAF1	P41910	395 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	ARC35	P53731	342 aa	Known RBP	4.26	□□□□□ -1.73
PMC1	YGL006W	TRS130	Q03660	1102 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	YMR155W	Q03795	547 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	TAF11	Q04226	346 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	URC2	Q04411	772 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	TDA5	Q06417	326 aa	Known RBP	4.26	□□□□□ -1.73
PMC1	YGL006W	NTG2	Q08214	380 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	YDR461C-A	Q2V2P7	80 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	TSC13	Q99190	310 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	BI3	Q9ZZW7	517 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	PMA1	P05030	918 aa	Known RBP	4.26	□□□□□ -1.73
PMC1	YGL006W	YER152C	P10356	443 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	RAP1	P11938	827 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	DBF2	P22204	572 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
PMC1	YGL006W	GID7	P25569	745 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	PEX3	P28795	441 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	YHR020W	P38708	688 aa	Known RBP	4.26	□□□□□ -1.73
PMC1	YGL006W	EGD2	P38879	174 aa	Known RBP	4.26	□□□□□ -1.73
PMC1	YGL006W	YTA6	P40328	754 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	FIG4	P42837	879 aa		4.26	□□□□□ -1.73
PMC1	YGL006W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	RIP-Chip
PMC1	YGL006W	NOP19	P53317	196 aa	Predicted RBP	4.26	□□□□□ -1.73
PMC1	YGL006W	THP2	O13539	261 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	MRP13	P12686	339 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	FBA1	P14540	359 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	SMI1	P32566	505 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	UGA4	P32837	571 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	YBR285W	P38354	144 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	SRP68	P38687	599 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	YJL070C	P40361	888 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	INP51	P40559	946 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	KEL2	P50090	882 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	NMA2	P53204	395 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	YNL033W	P53964	284 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	YNL019C	P53975	284 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	DID2	P69771	204 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	ROD1	Q02805	837 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	CWC21	Q03375	135 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	ERB1	Q04660	807 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	COQ9	Q05779	260 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	HER1	Q12276	1246 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	GPM3	Q12326	303 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	GPM1	P00950	247 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	ARG3	P05150	338 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	PRR1	P28708	518 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	ACH1	P32316	526 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	SUV3	P32580	737 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	OCT1	P35999	772 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	RCN1	P36054	211 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	ATG14	P38270	344 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	THO1	P40040	218 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	ARF3	P40994	183 aa	RIP-Chip data	4.25	□□□□□ -1.73	not detected
PMC1	YGL006W	CNN1	P43618	361 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	ARC1	P46672	376 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	CDC55	Q00362	526 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	SRL4	Q03085	281 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	NGL2	Q03264	515 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	SPH1	Q06160	661 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
PMC1	YGL006W	YOL159C	Q08300	171 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	ESA1	Q08649	445 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	MSC6	Q08818	692 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	HSP42	Q12329	375 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	YMR030W-A	Q3E760	96 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	ECM3	Q99252	613 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	RHO2	P06781	192 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	MIS1	P09440	975 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	SEN2	P16658	377 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	PHO84	P25297	587 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	LRE1	P25579	583 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	RPC34	P32910	317 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	TOD6	P34219	525 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	MEF2	P39677	819 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	TMA108	P40462	946 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	ASG7	P46993	209 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	ACF4	P47129	309 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	CWC23	P52868	283 aa	Predicted RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	LSM3	P57743	89 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	TAF12	Q03761	539 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	RPN9	Q04062	393 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	TIF35	Q04067	274 aa	Known RBP	4.25	□□□□□ -1.73
PMC1	YGL006W	KCS1	Q12494	1050 aa		4.25	□□□□□ -1.73
PMC1	YGL006W	ATP2	P00830	511 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	TUB2	P02557	457 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	RPL4A	P10664	362 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	HRR25	P29295	494 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	SHP1	P34223	423 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	VID24	P38263	362 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	SLX1	P38324	304 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	YLF2	P38746	405 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	VMA7	P39111	118 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	GEM1	P39722	662 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	YJR061W	P40355	935 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	ARG2	P40360	574 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	FIS1	P40515	155 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	PHO86	P46956	311 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms