RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C NMD2P38798 1089 aaKnown RBP2.54□□□□□ -2
PRE4YFR050C NUP60P39705 539 aa2.54□□□□□ -2
PRE4YFR050C BAP3P41815 604 aa2.54□□□□□ -2
PRE4YFR050C CIS3P47001 227 aa2.54□□□□□ -2
PRE4YFR050C MTL1P53214 551 aa2.54□□□□□ -2
PRE4YFR050C YAP1802P53309 568 aa2.54□□□□□ -2
PRE4YFR050C YNL193WP53870 558 aa2.54□□□□□ -2
PRE4YFR050C SEC5P89102 971 aa2.54□□□□□ -2
PRE4YFR050C TRS23Q03784 219 aa2.54□□□□□ -2
PRE4YFR050C UTP14Q04500 899 aaKnown RBP2.54□□□□□ -2
PRE4YFR050C BSP1Q06604 576 aa2.54□□□□□ -2
PRE4YFR050C DIA2Q08496 732 aaPredicted RBP2.54□□□□□ -2
PRE4YFR050C MRH1Q12117 320 aaPredicted RBP2.54□□□□□ -2
PRE4YFR050C PGA3Q12746 312 aaKnown RBP2.54□□□□□ -2
PRE4YFR050C YKL033W-AQ86ZR7 236 aa2.54□□□□□ -2
PRE4YFR050C TAD3Q9URQ3 322 aa2.54□□□□□ -2
PRE4YFR050C RAD3P06839 778 aa2.53□□□□□ -2
PRE4YFR050C PIF1P07271 859 aa2.53□□□□□ -2
PRE4YFR050C PYC1P11154 1178 aaKnown RBP2.53□□□□□ -2
PRE4YFR050C GFA1P14742 717 aaKnown RBP2.53□□□□□ -2
PRE4YFR050C YCL049CP25577 312 aa2.53□□□□□ -2
PRE4YFR050C HIR1P32479 840 aa2.53□□□□□ -2
PRE4YFR050C MNN4P36044 1178 aa2.53□□□□□ -2
PRE4YFR050C YEL025CP39991 1188 aa2.53□□□□□ -2
PRE4YFR050C PAN2P53010 1115 aaPredicted RBP2.53□□□□□ -2
PRE4YFR050C TRM82Q03774 444 aa2.53□□□□□ -2
PRE4YFR050C NDJ1Q12366 352 aa2.53□□□□□ -2
PRE4YFR050C ECM3Q99252 613 aa2.53□□□□□ -2
PRE4YFR050C CYB2P00175 591 aa2.52□□□□□ -2.01
PRE4YFR050C REV1P12689 985 aa2.52□□□□□ -2.01
PRE4YFR050C RPL8AP17076 256 aaKnown RBP2.52□□□□□ -2.01
PRE4YFR050C HCA4P20448 770 aaKnown RBP2.52□□□□□ -2.01
PRE4YFR050C DMC1P25453 334 aa2.52□□□□□ -2.01
PRE4YFR050C CDC39P25655 2108 aaKnown RBP2.52□□□□□ -2.01
PRE4YFR050C HEL1P36113 551 aa2.52□□□□□ -2.01
PRE4YFR050C TDA3P38758 523 aa2.52□□□□□ -2.01
PRE4YFR050C GPI16P38875 610 aa2.52□□□□□ -2.01
PRE4YFR050C QRI1P43123 477 aaKnown RBP2.52□□□□□ -2.01
PRE4YFR050C LAM5P43560 674 aa2.52□□□□□ -2.01
PRE4YFR050C PMT3P47190 753 aa2.52□□□□□ -2.01
PRE4YFR050C MRX6P48564 524 aa2.52□□□□□ -2.01
PRE4YFR050C ADA2Q02336 434 aa2.52□□□□□ -2.01
PRE4YFR050C YLR001CQ07895 862 aa2.52□□□□□ -2.01
PRE4YFR050C CLF1Q12309 687 aaPredicted RBP2.52□□□□□ -2.01
PRE4YFR050C SKM1Q12469 655 aa2.52□□□□□ -2.01
PRE4YFR050C ERG20P08524 352 aaKnown RBP2.51□□□□□ -2.01
PRE4YFR050C PDA1P16387 420 aaKnown RBP2.51□□□□□ -2.01
PRE4YFR050C PHO11P35842 467 aa2.51□□□□□ -2.01
PRE4YFR050C SIF2P38262 535 aa2.51□□□□□ -2.01
PRE4YFR050C TDP1P38319 544 aa2.51□□□□□ -2.01
PRE4YFR050C PHO12P38693 467 aa2.51□□□□□ -2.01
PRE4YFR050C SSZ1P38788 538 aaKnown RBP2.51□□□□□ -2.01
PRE4YFR050C LYS9P38999 446 aa2.51□□□□□ -2.01
PRE4YFR050C YJL206CP39529 758 aa2.51□□□□□ -2.01
PRE4YFR050C HMF1P40037 129 aaKnown RBP2.51□□□□□ -2.01
PRE4YFR050C GET2P40056 285 aa2.51□□□□□ -2.01
PRE4YFR050C YNL195CP40168 261 aa2.51□□□□□ -2.01
PRE4YFR050C PIG2P40187 538 aa2.51□□□□□ -2.01
PRE4YFR050C ARG2P40360 574 aa2.51□□□□□ -2.01
PRE4YFR050C NDC80P40460 691 aa2.51□□□□□ -2.01
PRE4YFR050C SMX3P54999 86 aaPredicted RBP2.51□□□□□ -2.01
PRE4YFR050C RCR2Q03446 210 aaKnown RBP2.51□□□□□ -2.01
PRE4YFR050C DSE3Q08729 430 aa2.51□□□□□ -2.01
PRE4YFR050C RRI2Q12348 645 aa2.51□□□□□ -2.01
PRE4YFR050C ZRT2Q12436 422 aa2.51□□□□□ -2.01
PRE4YFR050C YGR161W-CQ3E744 92 aa2.51□□□□□ -2.01
PRE4YFR050C APM4Q99186 491 aa2.51□□□□□ -2.01
PRE4YFR050C SIR3P06701 978 aa2.5□□□□□ -2.01
PRE4YFR050C ABF1P14164 731 aa2.5□□□□□ -2.01
PRE4YFR050C CWP1P28319 239 aa2.5□□□□□ -2.01
PRE4YFR050C PRO3P32263 286 aaKnown RBP2.5□□□□□ -2.01
PRE4YFR050C PRP19P32523 503 aaKnown RBP2.5□□□□□ -2.01
PRE4YFR050C FPR3P38911 411 aaKnown RBP2.5□□□□□ -2.01
PRE4YFR050C HRB1P38922 454 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
PRE4YFR050C FAU1P40099 211 aa2.5□□□□□ -2.01
PRE4YFR050C IES1P43579 692 aa2.5□□□□□ -2.01
PRE4YFR050C NOP9P47077 666 aaKnown RBP2.5□□□□□ -2.01
PRE4YFR050C YJR039WP47107 1121 aa2.5□□□□□ -2.01
PRE4YFR050C BPL1P48445 690 aaPredicted RBP2.5□□□□□ -2.01
PRE4YFR050C COQ5P49017 307 aa2.5□□□□□ -2.01
PRE4YFR050C YMR210WQ03649 449 aa2.5□□□□□ -2.01
PRE4YFR050C HMO1Q03973 246 aaKnown RBP2.5□□□□□ -2.01
PRE4YFR050C USV1Q12132 391 aa2.5□□□□□ -2.01
PRE4YFR050C BLM10P43583 2143 aa2.5□□□□□ -2.01
PRE4YFR050C RPL7AP05737 244 aaKnown RBP2.49□□□□□ -2.01
PRE4YFR050C WHI2P12611 486 aa2.49□□□□□ -2.01
PRE4YFR050C MTF1P14908 341 aaKnown RBP2.49□□□□□ -2.01
PRE4YFR050C SGV1P23293 657 aaKnown RBP2.49□□□□□ -2.01
PRE4YFR050C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
PRE4YFR050C RAD16P31244 790 aa2.49□□□□□ -2.01
PRE4YFR050C GLG1P36143 616 aa2.49□□□□□ -2.01
PRE4YFR050C AXL2P38928 823 aa2.49□□□□□ -2.01
PRE4YFR050C CKB2P38930 258 aa2.49□□□□□ -2.01
PRE4YFR050C BDH2P39713 417 aa2.49□□□□□ -2.01
PRE4YFR050C GID8P40208 455 aa2.49□□□□□ -2.01
PRE4YFR050C RET2P43621 546 aa2.49□□□□□ -2.01
PRE4YFR050C YGR153WP48238 217 aa2.49□□□□□ -2.01
PRE4YFR050C FMS1P50264 508 aa2.49□□□□□ -2.01
PRE4YFR050C VPS73P53142 486 aaKnown RBP2.49□□□□□ -2.01
PRE4YFR050C MDR1P53258 950 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms