RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	FTR1	P40088	404 aa		4.22	□□□□□ -1.73
TPA1	YER049W	MKT1	P40850	830 aa	Known RBP	4.22	□□□□□ -1.73
TPA1	YER049W	RNR4	P49723	345 aa	Known RBP	4.22	□□□□□ -1.73
TPA1	YER049W	SHE10	P53075	577 aa		4.22	□□□□□ -1.73
TPA1	YER049W	RCF2	P53721	224 aa		4.22	□□□□□ -1.73
TPA1	YER049W	TPP1	Q03796	238 aa		4.22	□□□□□ -1.73
TPA1	YER049W	BUD22	Q04347	519 aa	Known RBP	4.22	□□□□□ -1.73
TPA1	YER049W	CRF1	Q04930	467 aa		4.22	□□□□□ -1.73
TPA1	YER049W	ORM2	Q06144	216 aa		4.22	□□□□□ -1.73
TPA1	YER049W	SPH1	Q06160	661 aa		4.22	□□□□□ -1.73
TPA1	YER049W	YET3	Q07451	203 aa		4.22	□□□□□ -1.73
TPA1	YER049W	THI72	Q08579	599 aa		4.22	□□□□□ -1.73
TPA1	YER049W	HRK1	Q08732	759 aa	Known RBP	4.22	□□□□□ -1.73
TPA1	YER049W	ECM3	Q99252	613 aa		4.22	□□□□□ -1.73
TPA1	YER049W	TRX1	P22217	103 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
TPA1	YER049W	RAD14	P28519	371 aa		4.21	□□□□□ -1.74
TPA1	YER049W	EFT1	P32324	842 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	YSC84	P32793	468 aa		4.21	□□□□□ -1.74
TPA1	YER049W	MDJ1	P35191	511 aa		4.21	□□□□□ -1.74
TPA1	YER049W	ATG19	P35193	415 aa		4.21	□□□□□ -1.74
TPA1	YER049W	YBR284W	P38150	797 aa		4.21	□□□□□ -1.74
TPA1	YER049W	PCM1	P38628	557 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	TRM5	P38793	499 aa		4.21	□□□□□ -1.74
TPA1	YER049W	FRT2	P39734	528 aa		4.21	□□□□□ -1.74
TPA1	YER049W	PDS1	P40316	373 aa	Predicted RBP	4.21	□□□□□ -1.74
TPA1	YER049W	PRY1	P47032	299 aa		4.21	□□□□□ -1.74
TPA1	YER049W	AVT1	P47082	602 aa		4.21	□□□□□ -1.74
TPA1	YER049W	MRM2	P53123	320 aa		4.21	□□□□□ -1.74
TPA1	YER049W	YGL039W	P53183	348 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	ASI1	P54074	624 aa		4.21	□□□□□ -1.74
TPA1	YER049W	DUS3	Q06053	668 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	YPR202W	Q08993	238 aa		4.21	□□□□□ -1.74
TPA1	YER049W	YDR215C	Q12240	137 aa		4.21	□□□□□ -1.74
TPA1	YER049W	TY1B-A	O13527	1196 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	ATP2	P00830	511 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	TEF1	P02994	458 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	MPH2	P0CD99	609 aa		4.21	□□□□□ -1.74
TPA1	YER049W	SNF5	P18480	905 aa		4.21	□□□□□ -1.74
TPA1	YER049W	MSH2	P25847	964 aa		4.21	□□□□□ -1.74
TPA1	YER049W	ICL1	P28240	557 aa	Predicted RBP	4.21	□□□□□ -1.74
TPA1	YER049W	DGR2	P32330	852 aa		4.21	□□□□□ -1.74
TPA1	YER049W	MRP4	P32902	394 aa		4.21	□□□□□ -1.74
TPA1	YER049W	AFR1	P33304	620 aa		4.21	□□□□□ -1.74
TPA1	YER049W	YKR015C	P36111	568 aa		4.21	□□□□□ -1.74
TPA1	YER049W	YKR078W	P36158	585 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	RIM2	P38127	377 aa		4.21	□□□□□ -1.74
TPA1	YER049W	DIA4	P38705	446 aa	Predicted RBP	4.21	□□□□□ -1.74
TPA1	YER049W	SCC4	P40090	624 aa		4.21	□□□□□ -1.74
TPA1	YER049W	MAM33	P40513	266 aa		4.21	□□□□□ -1.74
TPA1	YER049W	SNZ3	P43545	298 aa		4.21	□□□□□ -1.74
TPA1	YER049W	TAF1	P46677	1066 aa		4.21	□□□□□ -1.74
TPA1	YER049W	ALY2	P47029	1046 aa		4.21	□□□□□ -1.74
TPA1	YER049W	MAD3	P47074	515 aa		4.21	□□□□□ -1.74
TPA1	YER049W	ASN1	P49089	572 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	NUP84	P52891	726 aa		4.21	□□□□□ -1.74
TPA1	YER049W	RTT102	P53330	157 aa		4.21	□□□□□ -1.74
TPA1	YER049W	SNZ2	P53824	298 aa		4.21	□□□□□ -1.74
TPA1	YER049W	TEP1	P53916	434 aa		4.21	□□□□□ -1.74
TPA1	YER049W	YNL058C	P53947	316 aa		4.21	□□□□□ -1.74
TPA1	YER049W	TVP15	Q03860	143 aa		4.21	□□□□□ -1.74
TPA1	YER049W	BCP1	Q06338	283 aa		4.21	□□□□□ -1.74
TPA1	YER049W	ADY3	Q07732	790 aa		4.21	□□□□□ -1.74
TPA1	YER049W	ISA1	Q07821	250 aa	Predicted RBP	4.21	□□□□□ -1.74
TPA1	YER049W	NSE1	Q07913	336 aa		4.21	□□□□□ -1.74
TPA1	YER049W	CUE5	Q08412	411 aa	Known RBP	4.21	□□□□□ -1.74
TPA1	YER049W	DIA2	Q08496	732 aa	Predicted RBP	4.21	□□□□□ -1.74
TPA1	YER049W	IES4	Q08561	116 aa		4.21	□□□□□ -1.74
TPA1	YER049W	RRP36	Q12481	300 aa	Predicted RBP	4.21	□□□□□ -1.74
TPA1	YER049W	UBR2	Q07963	1872 aa		4.2	□□□□□ -1.74
TPA1	YER049W	PRP6	P19735	899 aa	Predicted RBP	4.2	□□□□□ -1.74
TPA1	YER049W	SLY1	P22213	666 aa		4.2	□□□□□ -1.74
TPA1	YER049W	YCK2	P23292	546 aa	Known RBP	4.2	□□□□□ -1.74
TPA1	YER049W	RSC6	P25632	483 aa		4.2	□□□□□ -1.74
TPA1	YER049W	CDC48	P25694	835 aa	Known RBP	4.2	□□□□□ -1.74
TPA1	YER049W	RAD16	P31244	790 aa		4.2	□□□□□ -1.74
TPA1	YER049W	TFC1	P32367	649 aa		4.2	□□□□□ -1.74
TPA1	YER049W	CDC12	P32468	407 aa	Known RBP	4.2	□□□□□ -1.74
TPA1	YER049W	GYP6	P32806	458 aa		4.2	□□□□□ -1.74
TPA1	YER049W	BCS1	P32839	456 aa		4.2	□□□□□ -1.74
TPA1	YER049W	YKL151C	P36059	337 aa		4.2	□□□□□ -1.74
TPA1	YER049W	SRL3	P36167	246 aa		4.2	□□□□□ -1.74
TPA1	YER049W	SWC5	P38326	303 aa		4.2	□□□□□ -1.74
TPA1	YER049W	YDR089W	P38966	869 aa		4.2	□□□□□ -1.74
TPA1	YER049W	NUP60	P39705	539 aa		4.2	□□□□□ -1.74
TPA1	YER049W	FLC2	P39719	783 aa		4.2	□□□□□ -1.74
TPA1	YER049W	SAW1	P39735	261 aa		4.2	□□□□□ -1.74
TPA1	YER049W	SIT1	P39980	628 aa		4.2	□□□□□ -1.74
TPA1	YER049W	KHA1	P40309	873 aa		4.2	□□□□□ -1.74
TPA1	YER049W	ARC1	P46672	376 aa	Known RBP	4.2	□□□□□ -1.74
TPA1	YER049W	ZAP1	P47043	880 aa		4.2	□□□□□ -1.74
TPA1	YER049W	TAH11	P47112	604 aa		4.2	□□□□□ -1.74
TPA1	YER049W	TEL2	P53038	688 aa		4.2	□□□□□ -1.74
TPA1	YER049W	YGR016W	P53209	190 aa		4.2	□□□□□ -1.74
TPA1	YER049W	YDR476C	Q03362	224 aa		4.2	□□□□□ -1.74
TPA1	YER049W	YDR179W-A	Q03983	463 aa		4.2	□□□□□ -1.74
TPA1	YER049W	RCL1	Q08096	367 aa	Predicted RBP	4.2	□□□□□ -1.74
TPA1	YER049W	NTG2	Q08214	380 aa		4.2	□□□□□ -1.74
TPA1	YER049W	GPA2	P10823	449 aa		4.19	□□□□□ -1.74
TPA1	YER049W	KIN82	P25341	720 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms