RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 STAG1Q8WVM7 1258 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 ZC4H2Q9NQZ6 224 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 PKD2L1Q9P0L9 805 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 APOEP02649 317 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 MAP2K2P36507 400 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 PRPSAP1Q14558 356 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 ZNF174Q15697 407 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 KLHL7Q8IXQ5 586 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 SMC5Q8IY18 1101 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 RUNDC3BQ96NL0 473 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 RAB3GAP1Q15042 981 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 HERC4Q5GLZ8 1057 aaPredicted RBP9.84□□□□□ -0.83
GABRB3-216ENST00000628124 EP400NLQ6ZTU2 488 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 TRIM42Q8IWZ5 723 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 ANKRD44Q8N8A2 993 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 NT5C3AQ9H0P0 336 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 XPAP23025 273 aaPredicted RBP9.84□□□□□ -0.83
GABRB3-216ENST00000628124 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.84□□□□□ -0.83
GABRB3-216ENST00000628124 BSPRYQ5W0U4 402 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 GOLGA5Q8TBA6 731 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 CCDC51Q96ER9 411 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 IFT122Q9HBG6 1241 aa9.84□□□□□ -0.83
GABRB3-216ENST00000628124 SRGAP2BP0DMP2 458 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 KPNA2P52292 529 aaKnown RBP9.83□□□□□ -0.84
GABRB3-216ENST00000628124 APOBRQ0VD83 1088 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 LONRF2Q1L5Z9 754 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 COPS6Q7L5N1 327 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 NLRX1Q86UT6 975 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 LINS1Q8NG48 757 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 POMGNT1Q8WZA1 660 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 LLPHQ9BRT6 129 aaKnown RBP9.83□□□□□ -0.84
GABRB3-216ENST00000628124 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 HESX1Q9UBX0 185 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 LRWD1Q9UFC0 647 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 KCNH3Q9ULD8 1083 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 GCKP35557 465 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 ADCY7P51828 1080 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 DZIP3Q86Y13 1208 aaKnown RBP9.83□□□□□ -0.84
GABRB3-216ENST00000628124 CCDC13Q8IYE1 715 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 MYCT1Q8N699 235 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 TCEANC2Q96MN5 208 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 TEKT2Q9UIF3 430 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 EIF3CLB5ME19 914 aaKnown RBP9.83□□□□□ -0.84
GABRB3-216ENST00000628124 BAG2O95816 211 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 IFNA8P32881 189 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 RASIP1Q5U651 963 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 CREB3L3Q68CJ9 461 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 NCAPH2Q6IBW4 605 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 ZBTB8OSQ8IWT0 167 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 ATP6V0A1Q93050 837 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 EIF3CQ99613 913 aaKnown RBP9.83□□□□□ -0.84
GABRB3-216ENST00000628124 MED10Q9BTT4 135 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 MRPL46Q9H2W6 279 aaKnown RBP9.83□□□□□ -0.84
GABRB3-216ENST00000628124 CCNT1O60563 726 aaKnown RBP9.83□□□□□ -0.84
GABRB3-216ENST00000628124 STAM2O75886 525 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 U2AF2P26368 475 aaKnown RBP eCLIP9.83□□□□□ -0.84
GABRB3-216ENST00000628124 SNX29Q8TEQ0 813 aa9.83□□□□□ -0.84
GABRB3-216ENST00000628124 GOLGA8KD6RF30 607 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 HGSO14964 777 aaPredicted RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 MYCLP12524 364 aaPredicted RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 RAD51AP2Q09MP3 1159 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 ADPGKQ9BRR6 497 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 KDM3AQ9Y4C1 1321 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 IGF1RP08069 1367 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 GNGT2O14610 69 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 TNNI1P19237 187 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 RNASE9P60153 205 aaKnown RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 APBA1Q02410 837 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 TCIRG1Q13488 830 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 IQCB1Q15051 598 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 GNPTABQ3T906 1256 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 RINT1Q6NUQ1 792 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 ANKRD42Q8N9B4 389 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 SUPT20HQ8NEM7 779 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 CCDC138Q96M89 665 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 FAM193BQ96PV7 902 aaPredicted RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 RABEP2Q9H5N1 569 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 TNNC2P02585 160 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 STAT1P42224 750 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 NOP14P78316 857 aaKnown RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 SPDYE1Q8NFV5 336 aaPredicted RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 DEPTORQ8TB45 409 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 NRBF2Q96F24 287 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 GPCPD1Q9NPB8 672 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 STK38LQ9Y2H1 464 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 NUB1Q9Y5A7 615 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 ATAD2BQ9ULI0 1458 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 LRRD1A4D1F6 860 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 CTNNA1P35221 906 aaKnown RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 SERPINB6P35237 376 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 MAP3K7CLP57077 242 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 LMNB2Q03252 620 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 ITKQ08881 620 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 ANO1Q5XXA6 986 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 AP1ARQ63HQ0 302 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 WAPLQ7Z5K2 1190 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 MAP7D3Q8IWC1 876 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 LRRC43Q8N309 656 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms