RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 A0A087X0B3 334 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 CTAGE15A4D2H0 777 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 COBLO75128 1261 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 TFRCP02786 760 aaKnown RBP19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 CTAGE8P0CG41 777 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 ARID4AP29374 1257 aaPredicted RBP19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 TUBB2AQ13885 445 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 WWC2Q6AWC2 1192 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 CTAGE6Q86UF2 777 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 CTAGE4Q8IX94 777 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 VGLL2Q8N8G2 317 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 TUBB2BQ9BVA1 445 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 SUGCTQ9HAC7 445 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 ABCB6Q9NP58 842 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 TRMT112Q9UI30 125 aaKnown RBP19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 SLC4A4Q9Y6R1 1079 aa19.72■□□□□ 0.75
ARHGEF1-213ENST00000595897 FAM205CA6NFA0 338 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 GSG1L2A8MUP6 293 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 N4BP3O15049 544 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 FXR1P51114 621 aaKnown RBP eCLIP19.71■□□□□ 0.756e-9■■■■□ 24.9
ARHGEF1-213ENST00000595897 DNAJC10Q8IXB1 793 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 ZNF654Q8IZM8 581 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 TMTC2Q8N394 836 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 SYMPKQ92797 1274 aaKnown RBP19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 TRIM34Q9BYJ4 488 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 AATFQ9NY61 560 aaKnown RBP eCLIP19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 GYPCP04921 128 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 CUL4BQ13620 913 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 HSP90B2PQ58FF3 399 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 CT47A1Q5JQC4 288 aaPredicted RBP19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 STAMQ92783 540 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 NUP88Q99567 741 aaPredicted RBP19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 NAPGQ99747 312 aaPredicted RBP19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 PRDM11Q9NQV5 511 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 PSD3Q9NYI0 1048 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 VPS54Q9P1Q0 977 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 DDX60Q8IY21 1712 aaKnown RBP19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 PUM3Q15397 648 aaKnown RBP19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 HLFQ16534 295 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 CCDC102AQ96A19 550 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 TMOD3Q9NYL9 352 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 CTNND2Q9UQB3 1225 aa19.71■□□□□ 0.75
ARHGEF1-213ENST00000595897 TUBB4BP68371 445 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 CDKAL1Q5VV42 579 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 GIGYF2Q6Y7W6 1299 aaKnown RBP19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 NLRP10Q86W26 655 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 LPIN2Q92539 896 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 GSDMAQ96QA5 445 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 RAB21Q9UL25 225 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 ACTN2P35609 894 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 PBX1P40424 430 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 SLC20A2Q08357 652 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 TMTC1Q8IUR5 882 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 MSANTD4Q8NCY6 345 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 CCDC51Q96ER9 411 aa19.7■□□□□ 0.74
ARHGEF1-213ENST00000595897 hCG_1642624A0A1W2PR95 340 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 USP5P45974 858 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 PIP4K2BP78356 416 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 L1RE1Q9UN81 338 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 KCPQ6ZWJ8 1503 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 N4BP1O75113 896 aaKnown RBP19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 STARD3NLO95772 234 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 VSNL1P62760 191 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 RASGRF1Q13972 1273 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 MIGA1Q8NAN2 632 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 STAG1Q8WVM7 1258 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 ZFP91Q96JP5 570 aaPredicted RBP19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 MYH7P12883 1935 aa19.69■□□□□ 0.74
ARHGEF1-213ENST00000595897 SNAP23O00161 211 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 PHACTR2O75167 634 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 ABL1P00519 1130 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 C10orf67Q8IYJ2 551 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 LCORLQ8N3X6 602 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 GBP3Q9H0R5 595 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 VPS16Q9H269 839 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 CDHR2Q9BYE9 1310 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 KRT2P35908 639 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 TNNT3P45378 269 aaPredicted RBP19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 ANKRD20A12PQ8NF67 263 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 RNF41Q9H4P4 317 aaPredicted RBP19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 FAN1Q9Y2M0 1017 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 MINDY4BA8MYZ0 360 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 PPP1R3GB7ZBB8 358 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 SEMA3EO15041 775 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 DPYDQ12882 1025 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 ZNF174Q15697 407 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 WHAMMP3Q1A5X7 153 aa19.68■□□□□ 0.74
ARHGEF1-213ENST00000595897 PKD1L3Q7Z443 1732 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 PRDM1O75626 825 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 SLC5A1P13866 664 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 IL2RBP14784 551 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 CDC25AP30304 524 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 RRAGBQ5VZM2 374 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 CYP26C1Q6V0L0 522 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 SLF1Q9BQI6 1058 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 BLZF1Q9H2G9 400 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 RASSF4Q9H2L5 321 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 ABHD10Q9NUJ1 306 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 WDR17Q8IZU2 1322 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms