RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ATP2B2Q01814 1243 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L24Q0WX57 530 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 CERS3Q8IU89 383 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 TGFBRAP1Q8WUH2 860 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 C12orf42Q96LP6 360 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 DNAJC18Q9H819 358 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 EMILIN3Q9NT22 766 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 FLT1P17948 1338 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 SIPA1L1O43166 1804 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 GDF11O95390 407 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 CNGA1P29973 690 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 G3BP1Q13283 466 aaKnown RBP eCLIP14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 LBX2Q6XYB7 198 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 MAPKAPK5Q8IW41 473 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 ARRDC4Q8NCT1 418 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 FAM161BQ96MY7 647 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 FEZ1Q99689 392 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 PALD1Q9ULE6 856 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 MAST2Q6P0Q8 1798 aa14.97□□□□□ -0.01
CDK5RAP3-216ENST00000579853 PTPREP23469 700 aa14.96□□□□□ -0.01
CDK5RAP3-216ENST00000579853 JAG1P78504 1218 aa14.96□□□□□ -0.01
CDK5RAP3-216ENST00000579853 CCDC158Q5M9N0 1113 aa14.96□□□□□ -0.01
CDK5RAP3-216ENST00000579853 WDR78Q5VTH9 848 aa14.96□□□□□ -0.01
CDK5RAP3-216ENST00000579853 FOCADQ5VW36 1801 aa14.95□□□□□ -0.02
CDK5RAP3-216ENST00000579853 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-216ENST00000579853 RTP1P59025 263 aa14.95□□□□□ -0.02
CDK5RAP3-216ENST00000579853 GRB14Q14449 540 aa14.95□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CATSPERGQ6ZRH7 1159 aa14.95□□□□□ -0.02
CDK5RAP3-216ENST00000579853 MAFAQ8NHW3 353 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-216ENST00000579853 ARHGAP45Q92619 1136 aa14.95□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SYMPKQ92797 1274 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CDX2Q99626 313 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-216ENST00000579853 KBTBD13C9JR72 458 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 STRNO43815 780 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 GH2P01242 217 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SMAD3P84022 425 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 TTC39AQ5SRH9 613 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 KIAA1683Q9H0B3 1180 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SEMA6BQ9H3T3 888 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 GPR108Q9NPR9 543 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 FLRT1Q9NZU1 646 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 ATP11BQ9Y2G3 1177 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CDK5RAP2Q96SN8 1893 aa14.94□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CNMDO75829 334 aa14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 GNAI2P04899 355 aa14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 OLFML2BQ68BL8 750 aa14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 TATDN1Q6P1N9 297 aa14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 TMED8Q6PL24 325 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 POTEEQ6S8J3 1075 aa14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 ZNF512BQ96KM6 892 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 EHD4Q9H223 541 aa14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CABP5Q9NP86 173 aa14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SLC5A4Q9NY91 659 aa14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SERPINB13Q9UIV8 391 aa14.93□□□□□ -0.02
CDK5RAP3-216ENST00000579853 TMEM265A0A087WTH1 108 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CYBAP13498 195 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 VCAM1P19320 739 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CYP2C19P33261 490 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SHHQ15465 462 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 ZYXQ15942 572 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SHROOM1Q2M3G4 852 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SLC39A5Q6ZMH5 540 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 DPP9Q86TI2 863 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 TTC6Q86TZ1 520 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 TRMT2AQ8IZ69 625 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 PRDM6Q9NQX0 595 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SNRKQ9NRH2 765 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SAP30BPQ9UHR5 308 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 NDUFB9Q9Y6M9 179 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 RLFQ13129 1914 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 LTBP2Q14767 1821 aa14.92□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CHD9Q3L8U1 2897 aa14.91□□□□□ -0.02
CDK5RAP3-216ENST00000579853 IGHA2P01877 340 aa14.91□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CYP2E1P05181 493 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-216ENST00000579853 RAB3GAP1Q15042 981 aa14.91□□□□□ -0.02
CDK5RAP3-216ENST00000579853 GJC2Q5T442 439 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-216ENST00000579853 C1orf53Q5VUE5 145 aa14.91□□□□□ -0.02
CDK5RAP3-216ENST00000579853 ADGRA1Q86SQ6 560 aa14.91□□□□□ -0.02
CDK5RAP3-216ENST00000579853 HOXC10Q9NYD6 342 aa14.91□□□□□ -0.02
CDK5RAP3-216ENST00000579853 MYH1P12882 1939 aa14.91□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SPDYE16A6NNV3 312 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 IPO8O15397 1037 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SEPT4O43236 478 aa14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 USP5P45974 858 aa14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SNX17Q15036 470 aa14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 ABCB5Q2M3G0 1257 aa14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CERKLQ49MI3 558 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 SHCBP1Q8NEM2 672 aa14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 NPLOC4Q8TAT6 608 aa14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 CDCA7LQ96GN5 454 aa14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 PRDM5Q9NQX1 630 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 BTBD7Q9P203 1132 aa14.9□□□□□ -0.02
CDK5RAP3-216ENST00000579853 ABCB7O75027 752 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 FOSL2P15408 326 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 CYP7A1P22680 504 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 ADORA2AP29274 412 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TNNI3KQ59H18 835 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 C9orf50Q5SZB4 431 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms