RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 PKN1Q16512 942 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 PCSK7Q16549 785 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 WASHC4Q2M389 1173 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 PRSS33Q8NF86 280 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 ATOH1Q92858 354 aaPredicted RBP3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 SUV39H2Q9H5I1 410 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 ZNF576Q9H609 170 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 TMOD3Q9NYL9 352 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 ANKIB1Q9P2G1 1089 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 TRAK1Q9UPV9 953 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 HRH3Q9Y5N1 445 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 SLX4Q8IY92 1834 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 KIF24Q5T7B8 1368 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 SPTBN2O15020 2390 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 LTN1O94822 1766 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 PCDH11XQ9BZA7 1347 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 PCDH11YQ9BZA8 1340 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 PIK3C2GO75747 1445 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 ZNF646O15015 1829 aaPredicted RBP3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 A0A1W2PNR3 127 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 SHTN1A0MZ66 631 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 DCDC2BA2VCK2 349 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 CDK2AP1O14519 115 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 NPHP1O15259 732 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 CAMTA2O94983 1202 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 H2AFB1P0C5Y9 115 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 H2AFB2P0C5Z0 115 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 GDF10P55107 478 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 TNP2Q05952 138 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 CXCL9Q07325 125 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 DMWDQ09019 674 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 TCF15Q12870 199 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 LRP8Q14114 963 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 UBAP2LQ14157 1087 aaKnown RBP3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 SHHQ15465 462 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 CFAP70Q5T0N1 1121 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 C1orf229Q6ZS94 237 aaPredicted RBP3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 ASCL5Q7RTU5 278 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 RAET1EQ8TD07 263 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 RAPGEF4Q8WZA2 1011 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 RMDN1Q96DB5 314 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 LTV1Q96GA3 475 aaPredicted RBP3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 ATG3Q9NT62 314 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 FAM86C1Q9NVL1 165 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 ZNRF3Q9ULT6 936 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 JAG2Q9Y219 1238 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 RIPOR2Q9Y4F9 1068 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 KDM3BQ7LBC6 1761 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 CARMIL3Q8ND23 1372 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 NPC1L1Q9UHC9 1359 aa3.22□□□□□ -1.89
TRAV1-1-201ENST00000542354 WASHC2AQ641Q2 1341 aa3.21□□□□□ -1.89
TRAV1-1-201ENST00000542354 MAP2P11137 1827 aaKnown RBP3.21□□□□□ -1.89
TRAV1-1-201ENST00000542354 VPS8Q8N3P4 1428 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 BCORQ6W2J9 1755 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 CNOT1A5YKK6 2376 aaKnown RBP3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 PRR23AA6NEV1 266 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 ADARB2-AS1A8MUL3 147 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 IGF2BP3O00425 579 aaKnown RBP eCLIP3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 C2CD2LO14523 706 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 PAX4O43316 350 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 DYRK3O43781 588 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 WDHD1O75717 1129 aaPredicted RBP3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 NPR1P16066 1061 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 CD33P20138 364 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 ALDH1B1P30837 517 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 CRKLP46109 303 aaKnown RBP3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 RGL3Q3MIN7 710 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 OXLD1Q5BKU9 147 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 OLFM4Q6UX06 510 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 PRR23BQ6ZRT6 265 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 HFE2Q6ZVN8 426 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 MOB2Q70IA6 237 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 GJD3Q8N144 294 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 ZBTB38Q8NAP3 1195 aaPredicted RBP3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 HERVK_113Q902F9 699 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 DEFB118Q96PH6 123 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 VPS33BQ9H267 617 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 ETNK1Q9HBU6 452 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 ZFYVE28Q9HCC9 887 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 CD320Q9NPF0 282 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 CABP1Q9NZU7 370 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 NARFQ9UHQ1 456 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 COG5Q9UP83 839 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 XIRP2A4UGR9 3374 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 CD163L1Q9NR16 1453 aa3.21□□□□□ -1.9
TRAV1-1-201ENST00000542354 POLR2AP24928 1970 aaKnown RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 WDR87Q6ZQQ6 2873 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 A6NJY4 79 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 DCXO43602 365 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 LILRB5O75023 590 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 ELNP15502 786 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 HOXB4P17483 251 aaPredicted RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 ATP4AP20648 1035 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 ARID4AP29374 1257 aaPredicted RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 NF2P35240 595 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 TXKP42681 527 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 PCBP4P57723 403 aaKnown RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 ST5P78524 1137 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 SEMA3FQ13275 785 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 RSPO4Q2I0M5 234 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms