RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 NFRKBQ6P4R8 1299 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 ZNF574Q6ZN55 896 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 CENPQQ7L2Z9 268 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 EXOC4Q96A65 974 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 BRD8Q9H0E9 1235 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 GOLGA8CPA6NN73 597 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 COBLO75128 1261 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 LCA5LO95447 670 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 PRLP01236 227 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 CASTP20810 708 aaKnown RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 MAPK9P45984 424 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 NFIAQ12857 509 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 MUM1L1Q5H9M0 696 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 SLC43A3Q8NBI5 491 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 IPCEF1Q8WWN9 437 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 OMA1Q96E52 524 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 ANKIB1Q9P2G1 1089 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 USTQ9Y2C2 406 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 PRG4Q92954 1404 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-204ENST00000504131 MAGI1Q96QZ7 1491 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-204ENST00000504131 SKAP2O75563 359 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-204ENST00000504131 IFFO1Q0D2I5 559 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 PALM2Q8IXS6 379 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 RAPGEF5Q92565 580 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 TBC1D7Q9P0N9 293 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 SLC4A4Q9Y6R1 1079 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 KTN1Q86UP2 1357 aaKnown RBP6.92□□□□□ -1.3
CLCN3-204ENST00000504131 CTTNBP2Q8WZ74 1663 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 CCDC18Q5T9S5 1454 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 CTNNA1P35221 906 aaKnown RBP6.92□□□□□ -1.3
CLCN3-204ENST00000504131 CCNHP51946 323 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-204ENST00000504131 CUL1Q13616 776 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 BRSK2Q8IWQ3 736 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 CKAP2LQ8IYA6 745 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 DDI1Q8WTU0 396 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 STAG1Q8WVM7 1258 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 LNPKQ9C0E8 428 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 SUCLA2Q9P2R7 463 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-204ENST00000504131 PHLDB1Q86UU1 1377 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-204ENST00000504131 FAM170AA1A519 330 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 MAP3K7O43318 606 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 SCNN1BP51168 640 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 PMS2P54278 862 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 TUBA4AP68366 448 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 LMNB2Q03252 620 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 TSHZ3Q63HK5 1081 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 ACMSDQ8TDX5 336 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 IFT81Q8WYA0 676 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 SIKE1Q9BRV8 207 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 POLKQ9UBT6 870 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 SCINQ9Y6U3 715 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 ERBB4Q15303 1308 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 POTEB2H3BUK9 544 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 STK25O00506 426 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 RHOBTB1O94844 696 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 IL33O95760 270 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 MYL3P08590 195 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 S100A1P23297 94 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 ARHGAP44Q17R89 818 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 CTAGE6Q86UF2 777 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 ARL6IP6Q8N6S5 226 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 ERO1AQ96HE7 468 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 CSRNP2Q9H175 543 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 TRPV6Q9H1D0 765 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 SH2D4AQ9H788 454 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 FANCFQ9NPI8 374 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 C8orf4Q9NR00 106 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 GIMAP4Q9NUV9 329 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 PRXQ9BXM0 1461 aa6.92□□□□□ -1.3
CLCN3-204ENST00000504131 URB2Q14146 1524 aaKnown RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 EIF4BP23588 611 aaKnown RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 PHBP35232 272 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 SPATA5Q8NB90 893 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 SKA1Q96BD8 255 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 ABHD8Q96I13 439 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 SNTNA6NMZ2 147 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 ATP11AP98196 1134 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 CBX3Q13185 183 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 SDE2Q6IQ49 451 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 RSRC2Q7L4I2 434 aaKnown RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 KRT27Q7Z3Y8 459 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 AFAP1L1Q8TED9 768 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 CEP295NLQ96MC4 621 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 MAP3K14Q99558 947 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 RRP7BPQ9NSQ0 103 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 EVA1CP58658 441 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 ATF7IPQ6VMQ6 1270 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 SH3KBP1Q96B97 665 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 FGD4Q96M96 766 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 EIF2AK1Q9BQI3 630 aaKnown RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 NAA15Q9BXJ9 866 aaKnown RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 NACAP1Q9BZK3 213 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 TACC3Q9Y6A5 838 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 FOXN3O00409 490 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 GNAT1P11488 350 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 MXI1P50539 228 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 LACTBP83111 547 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 GOLGA8FQ08AF8 430 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms